Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1163 ATGGACGGTACTGTTCGAACTATGGTGTTCCTGATGTTTATATACTTATCGTCTGTGAGTATAAAAGCTGATATACCACTTGGTTCCTCACTTTCACCCAATGGAGGTAGTAACTCCAGTTTTTGGGTTTCCCCTTCTGGTGTATTTGCATTTGGCTTTTATAAGCAAGATGATGGCTTCGGTGTTGGAATCTGGTTGGCTGGCGTGAAAAACGATATTGTGGTATGGAGTGCAAACCGGGGTGATCCTCCTCTCACCTCAAATGCAACACTACAACTATCCGCGGAAGGTATCGAGCTTGTTGACCAAGGACAAGGTAAGCTTATTGCTAATGCCAATGCAACTACTTTCTATGCCTCCATGAATGATTCTGGGAACTTTGTATTATACAATAAAGAATCTAATATCACATGGCAGAGTTTCGATTACCCGACCAATACTATATTAGGGGGTCAAACTCTGCGTGCTGGAGGTCAATTGGTGTCAAGTTATTCATATACCAATCATTCCACTGGACAGTACCATCTCAAGATGCAGGATGATGGAAACCTTGTTCTCTATCCATTGAATACAGATGATGAGCCAGTGGATGCTTACTGGAGCTCTGGTACTTCAGGCTTTATTGGCTCCAGATTTCATCTCTACCTAAACAAAACAGGTATGCTTGTGATCAGGAATGGCAGTGATTTGAATTTGAATGCGATCAAATATCTTTATGGCGATTCATTTTCAAATAACAAAGACAATCAAACCATATATCGTGCAACACTGGGTTATGATGGATTTTTTCGTCTGTATGTTCATTTTAAGAATGGGGATGAAAATAAACTTGCATATTGGCCTAATGGCAATGCATGTGCTGTAAAGGCTTTTTGTGGCTTCAACAGCTACTGCACATTTTCTGACGACCAACCCTACTGCCAGTGTCTTCAGGGATTTGACTACATAGATCCAAATGAAGGAACTCTTGGGTGTAATAGGAATTTCTCAGAAGGAGAGTGTAGTGGTGAGAAAGATAATGCAGCCTCTTATAACATGGTGTATATGAGGAATATTAACTGGGGTGATCATGCTTATTCCGAAGCCATAATGTCACGGGAAGAAGAATGCTCCTCTTCTTGTTTGGCAGATTGCAATTGTTGGGCTGCTATTTATGAGGGAGGGGTATGCAAGAAACAAGAGCCACCTTTGAGATATGTGAATATGACAATAATGGTGGATAATGATGTCACCACCATTACCACCACTGCATTCTTAAAGGTTGGAAACATAAGCCTCGATCATAAGCCTGTGCCGGACCAAACACTTCCAACCATCAAGACGACTAGTAGCAAAGCAATAATGCACATTATTCTAGTTATATCAGGTTTTACTTTCCTTTTATGTCTAACTGTTGCAATCTCTAGCCATTTTATTCATAAGATTCGAGTTTTGAGGTACAAAAGGCTGGTGGAGAACAGGAACTTGGGCTTGAATGAAGAGGTGGCTTTACGGAGATTTTCATACAGCGAGCTCAAGCGAGCAACAAAGGGCTTCAAAGAAGAGTTGGGCAAGGGATCATTTGGAGCAGTTTACAAGGGGAGTTTGTACAAAGGTAAAAGATTGATTGCGGTAAAGAGACTAGAGAAGTTGGTTGAAGATGGAGAAAGGGAGTTTCAAGCGGAAATGAGAGCCATTGGGAAAACACACCACAGGAACCTAGTTCACTTGTTTGGCTATTGCGCTGAGGGTTCTAAAAGGCTTCTTGTTTATGAATACATGAGCAATAGTTCCCTCGGAAAGCTTATCTTTGGGGATGGAAGACTTCCAGAGTGGAATGAAAGAGTGAGAATTGCACTCAACATTGCAAGAGGGATCCTCTATCTCCATGAAGAGTGTGAGGCTCCAATCATTCATTGTGACATAAAGCCTCAAAACATTCTCATGGATGAGTTCTGGACAGCCAAAATATCCGATTTCGGGCTAGCAAAACTTCTCATGCCGGACCAGACCAGGACCTTCACTGTGGTACGAGGGACACGAGGTTACATGGCACCTGAATGGAACAAGAACATTCCAATATCAGTGAAGGCAGATATTTATAGCTATGGAATAGTTCTATTGGAAATTATATGTTGCAGAAGAAACTTTGAAGTGAATCTCTTAAAACCAGAGGAGATTCTTCTCTCAGATTGGGTTTATAAGTGCTTCATTGCAGGAGAGTTAAATAAGCTTGTTCTTTGGGAAGACGTTGATATAAAAATCATCGAAAGTATGGTTAAGGTGGCACTTTGGTGCATCCAAGATGATCCTGTTATCCGCCCAACAATGAAGAGCGTGGTGTTGATGTTAGAAGGGGTTACCAATATAGCTATTCCTCCTTGTCCAACTTCTTCATGA 2379 0.414 MDGTVRTMVFLMFIYLSSVSIKADIPLGSSLSPNGGSNSSFWVSPSGVFAFGFYKQDDGFGVGIWLAGVKNDIVVWSANRGDPPLTSNATLQLSAEGIELVDQGQGKLIANANATTFYASMNDSGNFVLYNKESNITWQSFDYPTNTILGGQTLRAGGQLVSSYSYTNHSTGQYHLKMQDDGNLVLYPLNTDDEPVDAYWSSGTSGFIGSRFHLYLNKTGMLVIRNGSDLNLNAIKYLYGDSFSNNKDNQTIYRATLGYDGFFRLYVHFKNGDENKLAYWPNGNACAVKAFCGFNSYCTFSDDQPYCQCLQGFDYIDPNEGTLGCNRNFSEGECSGEKDNAASYNMVYMRNINWGDHAYSEAIMSREEECSSSCLADCNCWAAIYEGGVCKKQEPPLRYVNMTIMVDNDVTTITTTAFLKVGNISLDHKPVPDQTLPTIKTTSSKAIMHIILVISGFTFLLCLTVAISSHFIHKIRVLRYKRLVENRNLGLNEEVALRRFSYSELKRATKGFKEELGKGSFGAVYKGSLYKGKRLIAVKRLEKLVEDGEREFQAEMRAIGKTHHRNLVHLFGYCAEGSKRLLVYEYMSNSSLGKLIFGDGRLPEWNERVRIALNIARGILYLHEECEAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTVVRGTRGYMAPEWNKNIPISVKADIYSYGIVLLEIICCRRNFEVNLLKPEEILLSDWVYKCFIAGELNKLVLWEDVDIKIIESMVKVALWCIQDDPVIRPTMKSVVLMLEGVTNIAIPPCPTSS* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1163 792 SUPERFAMILY Protein kinase-like (PK-like) 494 778 IPR011009 -
Lan12g1163 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 165 IPR036426 -
Lan12g1163 792 Gene3D - 144 273 IPR036426 -
Lan12g1163 792 Pfam D-mannose binding lectin 74 155 IPR001480 -
Lan12g1163 792 Pfam S-locus glycoprotein domain 246 314 IPR000858 GO:0048544
Lan12g1163 792 Gene3D Phosphorylase Kinase; domain 1 476 586 - -
Lan12g1163 792 SMART serkin_6 510 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1163 792 Gene3D - 24 143 IPR036426 -
Lan12g1163 792 PANTHER RUST RESISTANCE KINASE LR10-RELATED 18 791 IPR045874 GO:0004672
Lan12g1163 792 Pfam Protein kinase domain 513 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1163 792 ProSiteProfiles Protein kinase domain profile. 510 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1163 792 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 18 791 - -
Lan12g1163 792 ProSitePatterns Protein kinases ATP-binding region signature. 516 539 IPR017441 GO:0005524
Lan12g1163 792 PIRSF SRK 3 792 IPR024171 GO:0004674
Lan12g1163 792 Coils Coil 538 558 - -
Lan12g1163 792 ProSiteProfiles Bulb-type lectin domain profile. 145 278 IPR001480 -
Lan12g1163 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 169 230 IPR036426 -
Lan12g1163 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Lan12g1163 792 SMART blect_4 33 144 IPR001480 -
Lan12g1163 792 ProSiteProfiles Bulb-type lectin domain profile. 27 142 IPR001480 -
Lan12g1163 792 Gene3D Transferase(Phosphotransferase) domain 1 587 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1163 Lan-Chr12 17922356 17925070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1163 499 787 Receptor kinase-like Gene Family AT5G20050 40.968 3.13e-65 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lan12g1163 Pkinase 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1163 - - ahf:112707609 992.26