Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1141 ATGGCTATTGCTGCTGCATCATTCTTGCTGCTATTCTTGAAATTGTCAACAATTTTCAGCTCTGCAGTTATCTTGCAGTCAAGGGACTGTGGCAATAATTGGTTAGCTCATTCATATTCTTCTCTTGGTGAAGAAATATTTTACATAAATGAGAATGCAGTGAACGAAATTGCTTTCTGTGAGGCCCTCCAATTGTATATCGAAAAGGGCTGCGATTTGAAGGACTACTTTGGAAGTAACAACTGTGCCTTGGATGCTTATTTTGTAAATTTACCTTCAAAAGCAGGTAGAAAGCTTTTGCAAAAGGATTTAAGCAATAAACCCACCACATCTCAAGGAGATTCTAAGCCTTTGCCAACCTCCGAAGTTGGTATTTTTGCAGGTGGGGCTTTGTTAGTATGTTGTGTTGTTCTTTGTCCTTGCTTTTATGCGAAGAGACGAGAAGCAACTTCTCATGCTGTTCTTGCCAAGGATCCAAATTCAATGGATTCAGTTTCCTCCTTTGAAGGAAACCCAGTTTCTGCTAAGGTCCCAGCAAGTCCTCTTCGCGTGCCACCCAGTCCTTCAAGATTCTCAATGTCTCCCAAACTCGGTAAACTTGATTCATTACAGCTCAACCTGAGTCAGGTTGTAAGAGCTACCCGTAACTTCTCAGAATCATTACAAATAGGAGAAGGTGGTTTTGGAACTGTCTACAAGGCTGAGTTAGAAGATAGTGTGGTTGTGGCTGTAAAACGTGCAAAAAGGGAACAATTTGAGAGTTTGAGAACTGAATTCCGCAGTGAAGTTGAACTTCTGGCCAAAATTGATCACCGAAATCTGGTTAAGCTACTAGGTTACATTGACAAAGAAAATGAACGCATACTTATTACAGAGTTTGTGCCAAATGGCACTCTTCGAGAACATTTGGATGGTCTGCGTGGAAAAATCCTGGATTTCAATCAGCGCCTTGGAATTGCTATTGACGTTGCTCATGGCTTGACCTATCTGCATCAGTATGCAGAAAAGCAAATTATCCACCGGGATGTGAAATCATCCAATATTCTTCTGACAGAAAGCATGCGAGCTAAAGTTGCTGATTTTGGATTTGCAAAGCTTGGTCCAATGAACTCTGATCAAACACACATTTCTACCAAAGTGAAGGGAACAGTTGGTTATTTGGACCCAGAGTATATGAAGACAAACCAACTCACTCCTAAGAGTGATGTTTATTCATTTGGGATTTTGCTTTTAGAAATTGTGACAGGCCGGCGTCCTGTGGAGTTAAAGAAAACCGTGGCAGAGCGTGTTACACTAAGATGGGCCTTTAGGAAGTTCAATGAAGGGAGTTTTGTAGAACTGGTGGATCCTTTAATGGCAGAAGCCATAAATAGAGATGTCCTGATGAAGATTTTTGATTTGGCATTTCAATGTGCAGCACCGGTCCGAGCAGATCGACCGGACATGAAATCGGTGGTAGAGCACTTGTGGACAATAAGGGCAGATTACCTTAAGAGTGCAAGGAGAGAATAA 1512 0.416 MAIAAASFLLLFLKLSTIFSSAVILQSRDCGNNWLAHSYSSLGEEIFYINENAVNEIAFCEALQLYIEKGCDLKDYFGSNNCALDAYFVNLPSKAGRKLLQKDLSNKPTTSQGDSKPLPTSEVGIFAGGALLVCCVVLCPCFYAKRREATSHAVLAKDPNSMDSVSSFEGNPVSAKVPASPLRVPPSPSRFSMSPKLGKLDSLQLNLSQVVRATRNFSESLQIGEGGFGTVYKAELEDSVVVAVKRAKREQFESLRTEFRSEVELLAKIDHRNLVKLLGYIDKENERILITEFVPNGTLREHLDGLRGKILDFNQRLGIAIDVAHGLTYLHQYAEKQIIHRDVKSSNILLTESMRAKVADFGFAKLGPMNSDQTHISTKVKGTVGYLDPEYMKTNQLTPKSDVYSFGILLLEIVTGRRPVELKKTVAERVTLRWAFRKFNEGSFVELVDPLMAEAINRDVLMKIFDLAFQCAAPVRADRPDMKSVVEHLWTIRADYLKSARRE* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1141 503 Pfam Protein tyrosine and serine/threonine kinase 222 489 IPR001245 GO:0004672|GO:0006468
Lan12g1141 503 PANTHER NODULATION RECEPTOR KINASE-LIKE PROTEIN 91 502 - -
Lan12g1141 503 SUPERFAMILY Protein kinase-like (PK-like) 203 493 IPR011009 -
Lan12g1141 503 SMART serkin_6 217 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1141 503 ProSitePatterns Protein kinases ATP-binding region signature. 223 245 IPR017441 GO:0005524
Lan12g1141 503 ProSiteProfiles Protein kinase domain profile. 217 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1141 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
Lan12g1141 503 Gene3D Phosphorylase Kinase; domain 1 189 293 - -
Lan12g1141 503 PANTHER OS07G0166700 PROTEIN 91 502 IPR045272 GO:0004714|GO:0006468
Lan12g1141 503 Gene3D Transferase(Phosphotransferase) domain 1 294 502 - -
Lan12g1141 503 CDD STKc_IRAK 223 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1141 Lan-Chr12 17738425 17741676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1141 202 489 Receptor kinase-like Gene Family AT5G59700 47.751 1.42e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Lan12g1141 PK_Tyr_Ser-Thr 6.4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1141 - - aprc:113845864 797.349