Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1131 ATGTTGATTTTGAAAGGAGGAAGCAGGCCACCATGGGTGGGACTTGGAGCTTCTGTGTGGGTTCAGATAGCTTCAGGGAATGCTTATGCATTTTCACTTTACTCACACTCTTTGAAATCTGTTCTTGGTTTCAACCAGCGCCAACTTACTCTTCTTGGTGTTGCTAATGATTTAGGTGAGAATGTTGGTCTTCTTCCTGGTCTTGCTTCTAACAAGTTTCCTCCTTCAGTCATTCTTTTCATTGGTGCTGTTTGCTCTTTCCTTGGTTTTGGTACTCTTTACCTCTCTCTCTCTAAAACCCTTACCTCCCTTCCTTATTGGCTGTTATGGTTGGCCCTGGCTGTTGCCGCCAACAGTTGTGCATGGTTATCCACTGCCGTTCTTGTAACCAACATGAGAAATTTCCCTGTCAGTAGAGGCAAAGTTGCTGGAATCCTCAAAGGTTATTCGGGGCTTAGTGCTTCGGTTTATACTCAAATTTTCAAAATTGTTCTTCATGATTCGTCTTCCGAGTTTTTATTGTTCCTCGCAGTTGGCATTCCTGTTTTATGCTTCAGTACCATGTTCCTTGTTAGGCCTTGTACTCCAGCTACTGGTGAAGATTCTGTAGAAAAAGGGCATTTTCTTTTTGTTCAAGTTTCTAGTTTGGTCTTGGGTTTATACATTCTTGCAACAAATATATTTGCTGATTTTCTCCCAATAAGCGGTATTGCTTCTTATATTTTGGTAACTGTGTTGATTCTCCTTCTCATGGCTCCACTTGCTATCCCTATAAAGATGACATTGTTTCCTAGAAAAGGTACCCGATCGCAAACAAAGGAGCAGCAAGTTGGTTCTTTAGAACCAGATTCTCCGATTCAAGAACGCAAAGAAGATCAAACACTGGCACAACCCCTTCTATCTTCTTCATCAGCTAATGTTCTTGGAGGTTATGATGATAATGATGGTTCATCTGAGGTGGCTATGCTTCTTGCTATGGGAGAGGGAGCAGTAAAGAAGAAGAGAAGGCCTAAAAGAGGGGAAGATTTTAAACTCACTGAGGCTTTAGTAAAAGCTGATTTCTGGTTACTTTTTTTTGTTTACTTTGTTGGTGTTGGAACTGGGATCACTGTTCTTAATAATCTAGCTCAAATTGGCATTGCACAAGGTGTGAAAGATACCACTACCTTACTATCACTTTTCAGTTTTTTCAATTTTGTGGGTCGGCTTGGTGGAGGAGTTGTTTCAGAACATTTTGTCAGGACTAAAACGTTGCCAAGGACTGTTTGGATGGCATGCACTCAAACAATTATGATCATGATATACTTTCTTTTTGCCTATGCTATCAAGGGAACCCTTTATCCTGCCATTGCATTTCTTGGCATATGCTATGGCGTGCAATTTTCGGTAGTGATTCCAACTGTTTCAGAGCTTTTTGGTTTAAGGGACTTTGGCTTAATGAGCAACTTCTTGGCTTTGGGAAATCCACTTGGAGCATTCCTTTTCTCAGCACTACTAGCAGGGTATGTATATGATAATGAGGCAGCAAAGCAACATGGTCTAGGCCTCATTGCTTCAAGTGCTTCATGTGTGGGTCCAAATTGCTTTAAGCTCACATTCTTGATCCTTGCTGGTGTATGTGCTGTGGGCACCATCCTGAGCACTATCTTGAGTATGAGAATTAAACCTGTTTACCAAAAGCTTTATGCTGGTGGTTCCTTTAGGCTGCCTCAAACTTCTGATCACTAA 1728 0.4138 MLILKGGSRPPWVGLGASVWVQIASGNAYAFSLYSHSLKSVLGFNQRQLTLLGVANDLGENVGLLPGLASNKFPPSVILFIGAVCSFLGFGTLYLSLSKTLTSLPYWLLWLALAVAANSCAWLSTAVLVTNMRNFPVSRGKVAGILKGYSGLSASVYTQIFKIVLHDSSSEFLLFLAVGIPVLCFSTMFLVRPCTPATGEDSVEKGHFLFVQVSSLVLGLYILATNIFADFLPISGIASYILVTVLILLLMAPLAIPIKMTLFPRKGTRSQTKEQQVGSLEPDSPIQERKEDQTLAQPLLSSSSANVLGGYDDNDGSSEVAMLLAMGEGAVKKKRRPKRGEDFKLTEALVKADFWLLFFVYFVGVGTGITVLNNLAQIGIAQGVKDTTTLLSLFSFFNFVGRLGGGVVSEHFVRTKTLPRTVWMACTQTIMIMIYFLFAYAIKGTLYPAIAFLGICYGVQFSVVIPTVSELFGLRDFGLMSNFLALGNPLGAFLFSALLAGYVYDNEAAKQHGLGLIASSASCVGPNCFKLTFLILAGVCAVGTILSTILSMRIKPVYQKLYAGGSFRLPQTSDH* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1131 575 SUPERFAMILY MFS general substrate transporter 11 196 IPR036259 -
Lan12g1131 575 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 574 - -
Lan12g1131 575 MobiDBLite consensus disorder prediction 267 282 - -
Lan12g1131 575 PANTHER NODULIN-LIKE/MFS TRANSPORTER 2 574 - -
Lan12g1131 575 CDD MFS_Mch1p_like 10 544 - -
Lan12g1131 575 Gene3D MFS general substrate transporter like domains 351 558 IPR036259 -
Lan12g1131 575 Pfam Nodulin-like 11 258 IPR010658 -
Lan12g1131 575 MobiDBLite consensus disorder prediction 267 292 - -
Lan12g1131 575 SUPERFAMILY MFS general substrate transporter 242 556 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1131 Lan-Chr12 17678809 17681742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1131 5 575 Nodulin-like Gene Family AT1G80530 56.719 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1131 - - gmx:100787328 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1131 12 17678809 17681742 Lan15g0251 15 2823364 2841239 PCT
Lan15g0251 15 2823364 2841239 Lan12g1131 12 17678809 17681742 PCT