Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1112 ATGTTGCTGATATGTTGCAGTAGAAAACTACCCTCCATGCTCTCCAGAATTGTAGTTGCACTTGTCCTTTCTCATGTTTTTATCTGTCAAGAGTTTCAACTTTTAGAGGCACAATCTTGGGTACAAGGTGGTTACTGGTTTTATGGGAGTGAATTTCCAGTTTCTGACATCAACTCTGCACTTTATACTCACCTTATATGTGCTTTTGCTGATGTTAACTCTTCCTCCTATGAACTCTCTATCCCCTCAACTGTTGAGCAAAAATTCTCTTCTTTCACAAGCACTCTCAAACTCAAGAACCCTTCTATCTCTACCCTTCTTTCCATTGCAGGTGGGAGTGCTAATTATAGTGTCATGTCATTTATGGTAAGTACTGCTTCTTCAAGGAAATCTTTCATTCAGTCTTCAATAAGATTAGCCAGGCTTTATGGTTTTCAAGGCTTGGATTTGAGTTGGGTCTCTGCTAACTCAAGTTCTGACATGAACAATATGGGAAGGCTTTTTGAAGAGTGGAGAAAAGCTGCAAAATCTGAGGCAACAAACTCTACAAATCTGGAACTGATCTTAACTGCAGCTGTTCCGTATCAACCTGATTCGGATTTTGCATCTTATCCTGCTGAGTCTATTAGAATTAACTTGAATTGGGTACATGTTTTGGCTTATGACTATTACATGCCTGAATGGGCAAATTTTACTGCTGCACATGCAGCCTTGTATGACCCTTCGAGCGATTTAAATACAGATTTTGGTATTAGGAAATGGATTAGTAGTGGAGTTCCTACTAGCAAATTGGTTTTGTCTTTGCCTTTCTATGGGTATGCCTGGAATCTTAGAAACCCCAAGAACAATGCAGTAGGTGCATCAGCAACAGGTCCAGCTATTACAGAAGGTGGAGATATGAGCTATAAGGACATCAAGGATTATGTTCAAAGATATGGAGGAGGGACTGAATTTTATAATGCTACTTATGTAGTCAACTACTACACAATAGGATCAAGTTGGATTGGTTTTGATGATGTTCAGGTTGTCAAAATTAAGGTATCTTATGCTAGCGAAAAAAAGCTACTTGGTTATGCTGTGTGGCAAGTTCCCTATGATGACAATTGGGTGCTTTCTAGTGCAGCAGCTGAACAGGTTGACAACAATGGACACCGAAATTGGCGATTATTAGTGATAATTTTGACGAAAACTAGTATATCTGTTATTCTATTAGGCATTGCAATTTACTACTTCAGGAGGAGATTACTAAAATCAAAGGGAATGACTAATGAAGCTAGAGAAGACCGGTCTAGTAAAGAAGCAGCAGGACATTTTCATGGCAATACTCCTGATCTGCAAGTCTTTAGCTTTTTGGATATTGAAGTAGCCACAGATAGATTTTCAGTAGAAAATAAGCTTGGCCAAGGTGGCTATGGTCCTGTTTACAAGGGCATCCTACTAGATGGCAAGGAAGTAGCTGTGAAAAAGCTATCAGCAGCTTCTACACAAGGATTCGAGGAATTCCAAAATGAGGTAACACTTACTGCAAGACTACAACATGTGAATCTTGTTAGACTCTTGGGTTTCTGCATTGAGAGGCAAGAACAGATGTTGGTCTATGAGTACATGCCAAACAAAAGCCTTGACTTTTACCTCTTTGACCCTATTAGGTGTTATCTTCTGGATTGGAGCAAACGTGTAGCCATCATTGAAGGAGTTACTCAAGGGCTTCTATATCTACAAGAATATTCTAGGTTGACAATAATTCATAGAGACATAAAAGCTAGTAACATTTTGTTAGATAACGAGATGAAGCCAAAGATATCAGACTTTGGTATGGCCAGAATATTCACAAAAGAAGACCTAGAAGCAAACACGGACAAGATTGTTGGAACATACGGTTATGTTCCTCCCGAGTACGTTAAGAAAGGCTTGTACTCCACTAAATCCGACGTGTACAGCTTTGGAATTCTGCTTCTACAAATTGTAAGTGGCAGGAAGACTGCAAGATTTTATGGTGAGCAGGAAAATTTAAGCCTCATGGAATATGCTTATGATCTGTGGAAAGAAGGAAAATACATGGAGTTTGTAGATCCTTCACTTGATGACAAATCTTGTCCATGTAAGTTATTGAGGTGCATGCAGATAGCTCTATTATGCGTGCAGGAAGATGCATATGATAGGCCACCCATGTTGGAAATTTGCTCTATGTTGAGGAATGAGGCTATTCTAGAATTCCCAAAGAAGCCTGCATTTTCAAAAGAAAAAGATGTGCAGGAGCCAAATAAGCAAGAAGCTGAAACTTCAATTAATGATGCAACAATTTCTCAACTTGTGGCCCGATAG 2325 0.3927 MLLICCSRKLPSMLSRIVVALVLSHVFICQEFQLLEAQSWVQGGYWFYGSEFPVSDINSALYTHLICAFADVNSSSYELSIPSTVEQKFSSFTSTLKLKNPSISTLLSIAGGSANYSVMSFMVSTASSRKSFIQSSIRLARLYGFQGLDLSWVSANSSSDMNNMGRLFEEWRKAAKSEATNSTNLELILTAAVPYQPDSDFASYPAESIRINLNWVHVLAYDYYMPEWANFTAAHAALYDPSSDLNTDFGIRKWISSGVPTSKLVLSLPFYGYAWNLRNPKNNAVGASATGPAITEGGDMSYKDIKDYVQRYGGGTEFYNATYVVNYYTIGSSWIGFDDVQVVKIKVSYASEKKLLGYAVWQVPYDDNWVLSSAAAEQVDNNGHRNWRLLVIILTKTSISVILLGIAIYYFRRRLLKSKGMTNEAREDRSSKEAAGHFHGNTPDLQVFSFLDIEVATDRFSVENKLGQGGYGPVYKGILLDGKEVAVKKLSAASTQGFEEFQNEVTLTARLQHVNLVRLLGFCIERQEQMLVYEYMPNKSLDFYLFDPIRCYLLDWSKRVAIIEGVTQGLLYLQEYSRLTIIHRDIKASNILLDNEMKPKISDFGMARIFTKEDLEANTDKIVGTYGYVPPEYVKKGLYSTKSDVYSFGILLLQIVSGRKTARFYGEQENLSLMEYAYDLWKEGKYMEFVDPSLDDKSCPCKLLRCMQIALLCVQEDAYDRPPMLEICSMLRNEAILEFPKKPAFSKEKDVQEPNKQEAETSINDATISQLVAR* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1112 774 SUPERFAMILY Chitinase insertion domain 271 337 IPR029070 -
Lan12g1112 774 Gene3D Transferase(Phosphotransferase) domain 1 536 748 - -
Lan12g1112 774 SMART serkin_6 460 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1112 774 CDD STKc_IRAK 466 731 - -
Lan12g1112 774 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 769 - -
Lan12g1112 774 Pfam Protein tyrosine and serine/threonine kinase 462 731 IPR001245 GO:0004672|GO:0006468
Lan12g1112 774 Gene3D - 270 337 IPR029070 -
Lan12g1112 774 MobiDBLite consensus disorder prediction 757 774 - -
Lan12g1112 774 Gene3D Phosphorylase Kinase; domain 1 419 535 - -
Lan12g1112 774 Gene3D Glycosidases 54 368 - -
Lan12g1112 774 CDD GH18_plant_chitinase_class_V 38 372 - -
Lan12g1112 774 SUPERFAMILY Protein kinase-like (PK-like) 442 731 IPR011009 -
Lan12g1112 774 Pfam Glycosyl hydrolases family 18 44 366 IPR001223 GO:0005975
Lan12g1112 774 SUPERFAMILY (Trans)glycosidases 45 384 IPR017853 -
Lan12g1112 774 ProSitePatterns Serine/Threonine protein kinases active-site signature. 581 593 IPR008271 GO:0004672|GO:0006468
Lan12g1112 774 SMART 2g34 40 366 IPR011583 GO:0008061
Lan12g1112 774 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 19 32 769 - -
Lan12g1112 774 MobiDBLite consensus disorder prediction 746 774 - -
Lan12g1112 774 ProSiteProfiles Protein kinase domain profile. 460 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1112 774 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 40 382 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1112 Lan-Chr12 17550676 17553792 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1112 442 745 Receptor kinase-like Gene Family AT4G11480 54.902 6.77e-112 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan12g1112 Glyco_hydro_18 3.8e-62 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1112 - - gmx:100787480 1117.83