Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1105 ATGCATCCAGGAGTGAATTGTATAAGCTTCACTGGTGGAGATACTGGCATTGCAATTTCAAAGAAGGCAAACATGATTCCTTTGCAAATGGAGTTGGGAGGAAAAGATGCCTGCATTGTACTTGAAGATGCAGACCTGGATTTGGTGGCTGCAAACATTATAAAAGGAGGTTTTTCATACAGTGGTCAGAGGTGCACCGCCGTTAAAGTTGTCCTGGTGATGGAATCTGTGGCTGATGCTTTGGTTGAGAAAGTGAATGCTAAAGTGGCAAAGCTCAGTGTTGGACCACCAGAGAATGACAGTGATATCACCCCAGTTGTATCAGAATCATCGGCCAATTTCATCGAAGGTCTAGTCTCGGATGCTAAACAGAAAGGAGCAACATTCTGCCAGGAGTACAAAAGAGAAGGCAATCTAATTTGGCCACTGCTACTGGATAATGTTAGGCCTGATATGAGGATTGCATGGGAGGAGCCATTTGGACCAGTTTTGCCGGTAATTAGGATCAATTCTGTTGAAGAAGGAATCAACCATTGTAATGCTAGCAACTTTGGACTTCAGGGATGTGTATTCACAAAGGATGTCAACAAAGCAATGCTGATCAGTGATGCAATGGAGACAGGAACAGTGCAGATAAATTCCGCCCCAGCTCGTGGACCGGATCATTTTCCCTTTCAGGGTATAAAGGATAGTGGAATTGGATCGCAAGGGATTACCAACAGCATAAACATGATGACCAAGGTTAAAACAACTGTGATCAACTTACCTAGCCCTTCTTATACAATGGGCTAG 792 0.4381 MHPGVNCISFTGGDTGIAISKKANMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLSVGPPENDSDITPVVSESSANFIEGLVSDAKQKGATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGINHCNASNFGLQGCVFTKDVNKAMLISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKTTVINLPSPSYTMG* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1105 263 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 58 69 IPR016160 GO:0016491
Lan12g1105 263 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 250 IPR016162 GO:0016491
Lan12g1105 263 PANTHER ALDEHYDE DEHYDROGENASE 1 263 - -
Lan12g1105 263 Pfam Aldehyde dehydrogenase family 2 250 IPR015590 GO:0016491
Lan12g1105 263 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 36 222 IPR016163 GO:0016620
Lan12g1105 263 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 1 263 - -
Lan12g1105 263 SUPERFAMILY ALDH-like 2 254 IPR016161 GO:0016491
Lan12g1105 263 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 30 37 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1105 Lan-Chr12 17509094 17511020 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1105 1 263 Aldehyde Dehydrogenase Gene Family AT2G24270 91.635 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1105 K00131 - gmx:100780041 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1105 12 17509094 17511020 Lan1g0295 1 2157222 2165307 LSH