Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1104 ATGGCATTAGCTGGGACTGGAGTGTTTTCAGAGACATTGGAGGGAGATGTATACAAGTACTATGCTGATGGAGAATGGAAGAAATCTTCTTCTGGTAAGAATGTTGCTATTATCAACCCCACTACCAGAAAGACTCAATACAAAGTTCAAGCTTGTTCACAAGAGGAGGTTAATAAGGTGATGGATTCAGCAAAATCTGCACAGAAGTTATGGGCAAAGACTCCGCTATGGAAACGAGCCGAACTTCTTCACAAGGCTGCTGCTATCCTCAAAGAGCATAAAGCTCCAATTGCTGAGTGCCTTGTGAAAGAAATAGCAAAGCCAGCCAAAGATGCAGTTACAGAGGTTGTAAGATCTGGGGATCTGATTTCTTACTGTGCCGAAGAAGGGGTAAGGATTCTGGGAGAGGGAAAGTTCTTGGTATCAGATAGTTTTCCTGGAAATGAAAGGACCAAGTATTGCCTCACATCCAAGGGTGCTGTTTCTGCTTTGCACATGGTTCATTGCTTTCACTTAGCTGGTTTTCCCAAAGGCCTAATCAGTTGTGTTACTGGCAAAGGCTCGGAGATCGGTGACTTCCTTACAATGCATCCAGGAGTGAATTGTATAAGCTTCACTGGTGGAGATACTGGCATTGCAATTTCAAAGAAGGCAAACATGATTCCTTTGCAAATGGAGTTGGGAGGAAAAGATGCCTGCATTGTACTTGAAGATGCAGACCTGGATTTGGTGGCTGCAAACATTATAAAAGGAGGTTTTTCATACAGTGGTCAGAGGTGCACCGCCGTTAAAGTTGTCCTGGTGATGGAATCTGTGGCTGATGCTTTGGTTGAGAAAGTGAATGCTAAAGTGGCAAAGCTCAGTGTTGGACCACCAGAGAATGACAGTGATATCACCCCAGTTGTATCAGAATCATCGGCCAATTTCATCGAAGGTCTAGTCTCGGATGCTAAACAGAAAGGAGCAACATTCTGCCAGGAGTACAAAAGAGAAGGCAATCTAATTTGGCCACTGCTACTGGATAATGTTAGGCCTGATATGAGGATTGCATGGGAGGAGCCATTTGGACCAGTTTTGCCGGTAATTAGGATCAATTCTGTTGAAGAAGGAATCAACCATTGTAATGCTAGCAACTTTGGACTTCAGGGATGTGTATTCACAAAGGATGTCAACAAAGCAATGCTGATCAGTGATGCAATGGAGACAGGAACAGTGCAGATAAATTCCGCCCCAGCTCGTGGACCGGATCATTTTCCCTTTCAGGGTATAAAGGATAGTGGAATTGGATCGCAAGGGATTACCAACAGCATAAACATGATGACCAAGGTTAAAACAACTGTGATCAACTTACCTAGCCCTTCTTATACAATGGGCTAG 1377 0.4386 MALAGTGVFSETLEGDVYKYYADGEWKKSSSGKNVAIINPTTRKTQYKVQACSQEEVNKVMDSAKSAQKLWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLISYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKGAVSALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKANMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLSVGPPENDSDITPVVSESSANFIEGLVSDAKQKGATFCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGINHCNASNFGLQGCVFTKDVNKAMLISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGITNSINMMTKVKTTVINLPSPSYTMG* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1104 458 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 3 158 - -
Lan12g1104 458 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 158 458 - -
Lan12g1104 458 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 231 417 IPR016163 GO:0016620
Lan12g1104 458 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 10 154 IPR016162 GO:0016491
Lan12g1104 458 Pfam Aldehyde dehydrogenase family 26 136 IPR015590 GO:0016491
Lan12g1104 458 Pfam Aldehyde dehydrogenase family 157 445 IPR015590 GO:0016491
Lan12g1104 458 SUPERFAMILY ALDH-like 17 449 IPR016161 GO:0016491
Lan12g1104 458 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 253 264 IPR016160 GO:0016491
Lan12g1104 458 PANTHER ALDEHYDE DEHYDROGENASE 158 458 - -
Lan12g1104 458 PANTHER ALDEHYDE DEHYDROGENASE 3 158 - -
Lan12g1104 458 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 160 445 IPR016162 GO:0016491
Lan12g1104 458 CDD ALDH_F11_NP-GAPDH 17 449 - -
Lan12g1104 458 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 225 232 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1104 Lan-Chr12 17509094 17514244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1104 3 458 Aldehyde Dehydrogenase Gene Family AT2G24270 82.661 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1104 K00131 - gmx:100789100 858.211