Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1098 ATGGGTTTGGGAGTATTTGGTTCTGTTATGGTTATGACACTTTTGTTCCAGCATTTGGCTTGTCAACAACCAAATACTGATGAGTTCTTTGTGTCTGAGTTTTTGAACAAGATGGGTTTCCATAACTACCCTGTTTCTGTTTGTTCATGGGAAAGGGTTTCCTGTGATGCAAATAGAGAACATGTTGTTGAATTAAATTTTTCTGCTATGGGCCTCTCTGGTCCTATTCCTGATAACTCCATAGGCAAGCTCAGCAAGCTTCAAACTTTGGATCTTAGCTTCAACAAAATCACTGCATTGCCTTCTGATTTCTGGAGTTTTAGCTCTCTCAAGACTCTTAACCTCTCCTCCAATCAGATTTCTGATTCACTTAACAACATTGGCAACTTTGGTTTTCTAGAAACCTTTGACTTATCCAGCAATAACTATGCTGATGAAATTCCTGAAGCTATCAGATCCCTTGTGAAATTGAGGGTCCTCAAACTTAGCCGCAACATGTTTACACAAAGCATTCCTTTAGGGATTCTCAAGTGCCAGTCTCTAGTTTCAATTGATCTTTCATCAAATCGGCTTAATGGAACACTTCCAGATGGTTTTGAAGCTGCTTTTCCTAAGCTGAGGACCTTGAACCTTGCTGGGAATAAAATTTATGGCCGTGTTTCGGATATTTCAGGGTTGAAGTCCATTGTGAGTCTCAATATATCAGGCAATTTGTTTGAGGGGTCTGTCATGGATGTGTTTCAGGAACAGTTGGAGGTCTTGGACCTTAGCAGAAACCAATTTCAAGGCCACATTCCTCAGGTACATTATAGCTCTAATTTCAATTGGTCTCATTTAGTTTATCTGGATTTGTCAGACAATGAGCTTAGTGGAGAGTTTTTCCAAAATTTGAATCAGACACTTAATATAAAGCACCTTAATCTTGCACACAATAGATTTACCAGACAGAAATTTCCACTGATTGAAATGCTCCCGGAGTTGGAATATCTGAATTTGTCCAAAAGTAGCCTTGTTGGTAACATTCCTAATGAAATCTCACAACTGAGTAATTTGAACGCACTTGATCTTTCTACGAATCATCTTACTGGGAAAGTCCCCTTGTTGAGAAATAGAGACCTCCAAATTCTTGACCTTTCAAACAACAACTTGAGTGGAGAAGTCTCTCCTTATGTCTTAGAGAAGCTCCCATTGATGGAGAAGTACAACTTCTCTTATAATAACTTAACCTTCTGTGCTTTAGAAATCAACCATGATATCATGCAAAAAACATTCTTTGGATCAGTGAACAGTTGTCCAATTGCAGCAAACCCGACTCTTTTCAAAAGAAGAGCTACCAAACACAATGGAATGAAGCTTGCTTTGGTATTAACCTTCGCAATGATATGCTTGCTTGCTGGGATTTTGTTTCTAGCATTTGTTTGCAGAAGGAGGACTAGAATGTGGGAAGTTAAGCAAAGTTCTTACAGAGAAGAACAAAATATTTCTGGACCCTTCTCATTCCAGACTGATTCAACTACTTGGGTGGCTGATGTTAAGCAGGCTACTTCTGTTCCGGTAGTAATCTTTGAGAAGCCATTGCTGAGCATTACATTTGCTGATCTCTTGTCAGCAACGTCAAATTTCGATAGGGGTACCCTTTTGGCTGAAGGAAAATTTGGTCCTGTTTATAGAGGCTTTCTGCCTGGTGGTATTCATGTGGCAGTTAAAGTTTTGGCGGTAGGGTCTACATTGACAGATCAAGAAGCTGCAAGAGAGCTCGAGTGTCTCGGTAGAATCAAGCACCCCAATCTAGTTCCTTTAACAGGATATTGTGTAGCTGGGGACCAAAGAATTGCCATATATGATTACATGGAGAATGGGAGCTTGCAGAATCTGCTTTATGACTTGCCACTTGGTTTGCAAAGCACAGAAGATTGGAGCACAGATACTTGGGAAGAAGCTCACAACAACGGGATTCAAAATGCTGGGTCTGAAGGGTTACTCACAACTTGGCCATTTCGCCACAAAATAGCCCTTGGCACTGCGCGAGCATTGGCATTCTTGCATCATGGATGCTCACCTCCAATTATTCATAGAGATGTTAAGGCTAGCAGTGTTTATTTGGACTATGACTTGGAGCCAAGGTTGTCTGACTTTGGTCTGGCTAAGATTTTTGGAAATGGCTTGGATGAGGAGATTGTGCGTGGCTCACCTGGCTATGTTCCACCGGAGTTTTCTCAACCAGAATTTGAGTCCCCAACACCAAAATCTGATGTGTACTGTTTTGGTGTTGTTCTCTTTGAGCTAATAACCGGAAAGAAGCCAGTTGATGATGATTATCCCGATGATAAGGAAGCAACATTGGTAAGTTGGGTCAGAGGACTGGTGAGAAAGAATCAAGCTTCAAGGGTTATTGATCCCAAAATTCGGGATACAGGACCCGATGAACAAATGGAGGAGGCTCTTAAGATCGGTTATCTATGCACGGCTGACTTGCCCTCCAAGCGACCGAGCATGCAGCAGATAGTTGGACTTCTAAAGGATATTGAACCTGCTGCTAATTAG 2544 0.4131 MGLGVFGSVMVMTLLFQHLACQQPNTDEFFVSEFLNKMGFHNYPVSVCSWERVSCDANREHVVELNFSAMGLSGPIPDNSIGKLSKLQTLDLSFNKITALPSDFWSFSSLKTLNLSSNQISDSLNNIGNFGFLETFDLSSNNYADEIPEAIRSLVKLRVLKLSRNMFTQSIPLGILKCQSLVSIDLSSNRLNGTLPDGFEAAFPKLRTLNLAGNKIYGRVSDISGLKSIVSLNISGNLFEGSVMDVFQEQLEVLDLSRNQFQGHIPQVHYSSNFNWSHLVYLDLSDNELSGEFFQNLNQTLNIKHLNLAHNRFTRQKFPLIEMLPELEYLNLSKSSLVGNIPNEISQLSNLNALDLSTNHLTGKVPLLRNRDLQILDLSNNNLSGEVSPYVLEKLPLMEKYNFSYNNLTFCALEINHDIMQKTFFGSVNSCPIAANPTLFKRRATKHNGMKLALVLTFAMICLLAGILFLAFVCRRRTRMWEVKQSSYREEQNISGPFSFQTDSTTWVADVKQATSVPVVIFEKPLLSITFADLLSATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLAVGSTLTDQEAARELECLGRIKHPNLVPLTGYCVAGDQRIAIYDYMENGSLQNLLYDLPLGLQSTEDWSTDTWEEAHNNGIQNAGSEGLLTTWPFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDYDLEPRLSDFGLAKIFGNGLDEEIVRGSPGYVPPEFSQPEFESPTPKSDVYCFGVVLFELITGKKPVDDDYPDDKEATLVSWVRGLVRKNQASRVIDPKIRDTGPDEQMEEALKIGYLCTADLPSKRPSMQQIVGLLKDIEPAAN* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1098 847 Pfam Protein tyrosine and serine/threonine kinase 545 837 IPR001245 GO:0004672|GO:0006468
Lan12g1098 847 SMART LRR_typ_2 107 130 IPR003591 -
Lan12g1098 847 SMART LRR_typ_2 324 348 IPR003591 -
Lan12g1098 847 SMART LRR_typ_2 84 106 IPR003591 -
Lan12g1098 847 SMART LRR_typ_2 368 394 IPR003591 -
Lan12g1098 847 SMART LRR_typ_2 154 178 IPR003591 -
Lan12g1098 847 SMART LRR_typ_2 203 226 IPR003591 -
Lan12g1098 847 Gene3D Ribonuclease Inhibitor 173 270 IPR032675 -
Lan12g1098 847 Gene3D Ribonuclease Inhibitor 31 172 IPR032675 -
Lan12g1098 847 ProSiteProfiles Leucine-rich repeat profile. 86 107 IPR001611 GO:0005515
Lan12g1098 847 PRINTS Leucine-rich repeat signature 279 292 - -
Lan12g1098 847 PRINTS Leucine-rich repeat signature 348 361 - -
Lan12g1098 847 ProSiteProfiles Leucine-rich repeat profile. 205 227 IPR001611 GO:0005515
Lan12g1098 847 Gene3D Ribonuclease Inhibitor 271 419 IPR032675 -
Lan12g1098 847 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 1 844 - -
Lan12g1098 847 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 844 - -
Lan12g1098 847 SUPERFAMILY L domain-like 32 412 - -
Lan12g1098 847 Gene3D Transferase(Phosphotransferase) domain 1 617 847 - -
Lan12g1098 847 ProSiteProfiles Leucine-rich repeat profile. 109 131 IPR001611 GO:0005515
Lan12g1098 847 Pfam Leucine rich repeat 180 238 IPR001611 GO:0005515
Lan12g1098 847 Pfam Leucine rich repeat 76 120 IPR001611 GO:0005515
Lan12g1098 847 Pfam Leucine Rich repeat 370 386 IPR001611 GO:0005515
Lan12g1098 847 Pfam Leucine Rich repeat 277 292 IPR001611 GO:0005515
Lan12g1098 847 SUPERFAMILY Protein kinase-like (PK-like) 526 839 IPR011009 -
Lan12g1098 847 CDD STKc_IRAK 547 842 - -
Lan12g1098 847 ProSiteProfiles Protein kinase domain profile. 541 846 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1098 847 Gene3D Phosphorylase Kinase; domain 1 501 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1098 Lan-Chr12 17463542 17469808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1098 57 846 Receptor kinase-like Gene Family AT4G39400 34.826 2.23e-110 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Lan12g1098 PK_Tyr_Ser-Thr 1.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1098 - - gmx:100787157 1385.93