Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1085 ATGGCTCTCATCATCTTCCTTTTCTTCTTCTTCCTCTCTCATGTTGCTCTATGTTCATCTTCGGAGCCTCGTAACCATGAAGTGGAAGCTTTGATGAGCATAAGAGAAGGTTTGAGTGATCCACACGGTGTGTTGAGCAATTGGGATGAGTACTCTGTTGATGCTTGTAGTTGGGCTATGATTACTTGTTCTTCTGATTCACTTGTTATTGGACTGGGAGCTCCTAGTCAATCTCTCTCTGGAACTTTGTCTCCAGCAATTGCTAATCTCACCAATCTTCGACAAGTGTTACTGCAGAATAACAATATCTCAGGCAAAATTCCACAGGAACTTGGAACCCTTCCCAAGCTTCAGACCTTAGATCTTTCTAATAACCATTTCTCAGGAGCCATTCCTGCATCTTTGAGTCAGTTGAATACTCTTCAGTACATGAGGCTCAACAACAATAGCTTGTGTGGACCTTTTCCTGTGTCACTTGCTAAAAATCCACACCTTACTTTCTTGGACTTGTCTTATAACAATCTTGAGGGACCATTGCCCAAGTTACCAGCCAAGTCATTCAATATTATGGGGAACCCATTAATTTGTGGAAGCAGCCCTGTTGAAGGTTGCTCTGGAACAGTAACCTTCAGGCTTGTTCCCTTTGCTCAAGCATTATCACAAGGGAAACAAAAGTCCAAAAAACTAGCAATTGCACTTGGAGCCAGCCTTAGTTGCGCTTCTATCATTTTTCTCTTTTTTGGACTCATTTGGCATAGAAAGAAACGACAATACCAAGCCGCCCTATATGTTAGTGGTTATAGGGAAGAGGGAGTTGTTAACTTGGGAAATCTAAAAAAGTTCACTTTCAGAGAGCTTCAACATGCAACAGATAATTTCAGCTCCAAGAACATACTTGGTGCTGGAGGTTTTGGCAATGTTTATAGGGGAAAGTTTGGAGACGGCACAATGGTGGCAGTGAAAAGGCTGAAGGATGTAACTGGAAGTGCTGGCGAGTCACAGTTCCAAACAGAATTGGAGATGATCAGCTTGGCAGTTCACCGCCACTTACTTCGCTTAATTGGATATTGCGCTACTCCTAGTGATAAACTTCTAGTTTATCCTTACATGTCTAATGGCAGTGTGGCATCCAGGCTTAGAGGGAAACCAGCTTTAGATTGGAACACAAGAAAGAGGATTGCAATTGGAGCTGCTAGAGGTCTTCTGTATCTGCACGAGCAATGTGATCCAAAGATAATACACAGAGATGTAAAGGCTGCTAATGTGCTTCTGGATGACTATTGTGAAGCTGTTGTTGGTGATTTTGGTCTTGCAAAGCTCTTGGACCATGCCGACTCCCATGTCACCACTGCTGTCCGTGGCACCGTTGGGCACATTGCACCAGAGTACCTTTCCACTGGCCAATCATCTGAGAAGACTGATGTATTTGGATTTGGCATTCTCTTGATAGAGCTCATAACTGGAATGACTGCTCTAGAGTTTGGGAAAACAGTGAATCAAAAAGGCGCTATGCTAGAGTGGGTTAGGAAAATACAGTGTGAAAAGAAGGTTGAAGTGTTGTTGGACAAAGAGCTAGTGAGCAACTATGATAGAATAGAAGTGGGGGAGATGCTGCAAGTAGCTTTACTTTGCACTCAAAATTTGCCAGCCCACCGCCCGAAAATGTCTGAAGTGGTCCGAATGCTCGAAGGCGATGGACTTGTGGAGAAGTGGGCTGCATTACATAATCATAGTAATCAAGGCATCACCCCCTGTCACAGTAACAGTAGCAGTAGTTCATCTCGTCCTACCTCTTCTGCTTCAAAACATGATGACAATGCTCATGATCGCTCAAGCATGTTTGGCATGACAATGGATGATGATGACGACGAACGTTCATTGGATTCCTATGCCATGGAACTATCTGGTCCTAGATGA 1917 0.4361 MALIIFLFFFFLSHVALCSSSEPRNHEVEALMSIREGLSDPHGVLSNWDEYSVDACSWAMITCSSDSLVIGLGAPSQSLSGTLSPAIANLTNLRQVLLQNNNISGKIPQELGTLPKLQTLDLSNNHFSGAIPASLSQLNTLQYMRLNNNSLCGPFPVSLAKNPHLTFLDLSYNNLEGPLPKLPAKSFNIMGNPLICGSSPVEGCSGTVTFRLVPFAQALSQGKQKSKKLAIALGASLSCASIIFLFFGLIWHRKKRQYQAALYVSGYREEGVVNLGNLKKFTFRELQHATDNFSSKNILGAGGFGNVYRGKFGDGTMVAVKRLKDVTGSAGESQFQTELEMISLAVHRHLLRLIGYCATPSDKLLVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDDYCEAVVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLIELITGMTALEFGKTVNQKGAMLEWVRKIQCEKKVEVLLDKELVSNYDRIEVGEMLQVALLCTQNLPAHRPKMSEVVRMLEGDGLVEKWAALHNHSNQGITPCHSNSSSSSSRPTSSASKHDDNAHDRSSMFGMTMDDDDDERSLDSYAMELSGPR* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1085 638 SUPERFAMILY L domain-like 24 189 - -
Lan12g1085 638 ProSiteProfiles Protein kinase domain profile. 293 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1085 638 Gene3D Transferase(Phosphotransferase) domain 1 370 581 - -
Lan12g1085 638 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 638 - -
Lan12g1085 638 Gene3D Phosphorylase Kinase; domain 1 264 369 - -
Lan12g1085 638 Gene3D Ribonuclease Inhibitor 24 206 IPR032675 -
Lan12g1085 638 MobiDBLite consensus disorder prediction 579 600 - -
Lan12g1085 638 SUPERFAMILY Protein kinase-like (PK-like) 276 563 IPR011009 -
Lan12g1085 638 MobiDBLite consensus disorder prediction 601 620 - -
Lan12g1085 638 MobiDBLite consensus disorder prediction 579 638 - -
Lan12g1085 638 Pfam Leucine rich repeat 115 175 IPR001611 GO:0005515
Lan12g1085 638 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Lan12g1085 638 SMART serkin_6 293 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1085 638 Pfam Protein tyrosine and serine/threonine kinase 296 562 IPR001245 GO:0004672|GO:0006468
Lan12g1085 638 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Lan12g1085 638 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 4 638 - -
Lan12g1085 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1085 Lan-Chr12 17383701 17388921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1085 1 638 Receptor kinase-like Gene Family AT5G16000 61.069 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lan12g1085 PK_Tyr_Ser-Thr 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1085 - - gmx:100797186 1036.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1085 12 17383701 17388921 Lan1g0325 1 2389697 2394299 LSH