Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1073 ATGATTTCGGGATCTTGTGTGAGTTTATTGAATTTGGTATCACAGGATGATTACCAAGTTTCTAATGCAATGACGGTTACACCAGAGTTCGAGATCGCTCACGTCAACAACGATCTTTCAAATTCAGGATCCGACGACGTCGTTTCAAATGACTCAAGGGAACGAAGAATCATCGTCGCGAACCAGTTACCTATACGCGCTTCACGCGACGTGGAAACAAAGAAATGGACATTCGAATTCGACAGTGACAGCTTGGTTCTCCAGCTCAAAGACGGTTTCCCCAACGACACGGAGGTTCTCTACGTCGGTTCCTTAAACACCGTCGTCGACGTTTCTGAACAGGATGACGTGGCACAAACCCTGTTAGAGAAATTCCGTTGCGTTCCAACGTTCATACCCACAGAAGTTCAGAACCGTTTCTACCATGGGTTCTGCAAGCATTACCTGTGGCCTCTTTTTCACTACATGCTTCCTCTTTCACCGAGCCACGGTGCGCGTTTCGACCGTTCTCAGTGGCAAGCTTATGTTTTGGCTAACAAGATCTTCGCTGATAAAGTAACCGAGGTGATAAACCCCGACGAGGATTACGTTTGGGTCCACGATTATCACCTCATGATCTTGCCCACTTTCTTGAGGAAGCGTTTTCACCGTGTAAAGCTCGGGTTTTTCTTGCACGGGCCTTTTCCTTCGTCGGAAATCTATAGAACTGCACCGGTTCGTGATGACATCCTTCGTGCCCTTTTGAATTGTGATTTGGTGGGGTTTCATACTTTTGATTACGCAAGGCATTTTTTGTCTTGTTGTAGTAGGATGTTGGGGTTGGATTACGAGTCAAAGAGGGGTTACATTGGGTTAGATTACTATGGTAGAACTGTTACTATTAAGATATTACCGGTTGGGATTCACATGGGTCAACTTGAATCTGTTTTGTCTTTGTCTGAGACAGCAAAGAGGGTTAAGGAGTTGAAGGAGGAGTATGAGGGTAAGGTTGTGATTTTGGGTGTTGATGACATGGATTTGTTTAAAGGTATTAGCTTTAAGTTTTTGGCAATGGGGCAGCTTTTGGAAGTGCACCAAGATTTGAGGGGTAGAGTGGTTTTGGTTCAGATTCTTAACCCTGCAAGGAGCTGTGGGAAAGATATTCAGGATGTTCAGGACGAGACTGAGGCTATTGCTAAGGAGATTAATGAGAAGTATGGCGGTCCGGGGTATCAGCCAATTGTTTTCATCAATGGCCCCGTTTCAACGCAGGAGAAGGCTGCATACTATGCTATTGCTGAGTGCTGTGTTGTAAATTGTGTGAGGGATGGGATGAATTTGGTGCCGTATAGGTACACTGTTTGCAGACAGGCAAGGGTTGCCTTGGACAAGGCTCTTGGCGTTGAAGATGAGTTTGTGAGGCCTAGGCAGAGTGTTATCATTGTTTCCGAATTCATCGGTTGCTCACCGTCTCTCAGCGGAGCAATTCGGGTGAATCCTTGGAACATTGATGATGTATCTGTGGCCATGAATTCAGCTATCAAAATGTCAGAGGCAGAAAAGCATTTGCGACATGAGAAGCATTATAAGTACATAAGCTCTCATGATGTGGCTTATTGGGCTAGGAGTTTTGATCAGGATTTGGAGAGAGCTTGTAGAGAGCTTTACCGCAAGAGGTGTTGGGGTGTTGGATTTGGTTTGGGATTCAGAATCATTGCCTTGGATCCTACATTTAGGAAGCTTTCGGTGCAAAAGATTGTCTCTGCTTATAGTCAAACACAGAATCGGTTGATCCTTTTGGACTATGATGGCACCATGATGCCACAGGCCTCAATAGACAAAACTCCAAGCGGTGGAGTTATCTCTGTGCTGAACCATTTATGCTGTGATCCCAAAAACATTGTTTTCATTGTCAGTGGCAGGGATAAGGATTGCCTCAGCAAGTGGTTTTCTCCATGTGAGAAATTGGGTCTATCTGCTGAGCATGGTTATTTCACTAGGTGGATTAGGGATTCTCCATGGGAGACGTGTGGATTGATGAATGACTTCGATTGGAAAAACATTGTGGAACCAGTGATGGCTCATTATACAGAAGCAACTGATGGTTCCTTCATTGAACAGAAGGAAAGTGCAATGGTTTGGCATCATCAAGAAGCGGATCCTCATTTCGGGTCATGCCAAGCAAAGGAGCTTCTTGATCACCTTGAGAGTGTGCTGGCTAATGAGCCTGTAGTGGTCAAGAGGGGACAGCATATAGTTGAAGTAAAACCTCAGGGTGTGAGCAAAGGTATAGTTGTAGAAAACCTTATCTCAACCATGAGAAAGGAGGGAAAATCACCAGATTTTCTACTGTGCATAGGAGATGATCGCTCAGATGAGGACATGTTTGAGAGCATTGCTCGGTCAGTTTCTAATCCTGCATTGCCAACTATTTCACAAGTGTTTGCATGCACTGTTGGTCAGAAACCAAGTAAGGCGAAATACTATTTGGATGATACTAGTGAAGTTATCAGCTTGCTGGAAGGACTTGCAATTGCATCAGCAGCACTATGA 2532 0.4475 MISGSCVSLLNLVSQDDYQVSNAMTVTPEFEIAHVNNDLSNSGSDDVVSNDSRERRIIVANQLPIRASRDVETKKWTFEFDSDSLVLQLKDGFPNDTEVLYVGSLNTVVDVSEQDDVAQTLLEKFRCVPTFIPTEVQNRFYHGFCKHYLWPLFHYMLPLSPSHGARFDRSQWQAYVLANKIFADKVTEVINPDEDYVWVHDYHLMILPTFLRKRFHRVKLGFFLHGPFPSSEIYRTAPVRDDILRALLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPVGIHMGQLESVLSLSETAKRVKELKEEYEGKVVILGVDDMDLFKGISFKFLAMGQLLEVHQDLRGRVVLVQILNPARSCGKDIQDVQDETEAIAKEINEKYGGPGYQPIVFINGPVSTQEKAAYYAIAECCVVNCVRDGMNLVPYRYTVCRQARVALDKALGVEDEFVRPRQSVIIVSEFIGCSPSLSGAIRVNPWNIDDVSVAMNSAIKMSEAEKHLRHEKHYKYISSHDVAYWARSFDQDLERACRELYRKRCWGVGFGLGFRIIALDPTFRKLSVQKIVSAYSQTQNRLILLDYDGTMMPQASIDKTPSGGVISVLNHLCCDPKNIVFIVSGRDKDCLSKWFSPCEKLGLSAEHGYFTRWIRDSPWETCGLMNDFDWKNIVEPVMAHYTEATDGSFIEQKESAMVWHHQEADPHFGSCQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGIVVENLISTMRKEGKSPDFLLCIGDDRSDEDMFESIARSVSNPALPTISQVFACTVGQKPSKAKYYLDDTSEVISLLEGLAIASAAL* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1073 843 Pfam Trehalose-phosphatase 592 827 IPR003337 GO:0003824|GO:0005992
Lan12g1073 843 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED 1 841 - -
Lan12g1073 843 CDD GT20_TPS 55 542 IPR001830 GO:0003824|GO:0005992
Lan12g1073 843 TIGRFAM T6PP: trehalose-phosphatase 588 836 IPR003337 GO:0003824|GO:0005992
Lan12g1073 843 Gene3D - 718 842 IPR023214 -
Lan12g1073 843 Gene3D - 588 705 IPR023214 -
Lan12g1073 843 Gene3D Glycogen Phosphorylase B; 309 526 - -
Lan12g1073 843 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 590 794 IPR006379 -
Lan12g1073 843 SUPERFAMILY HAD-like 589 837 IPR036412 -
Lan12g1073 843 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 55 546 - -
Lan12g1073 843 CDD HAD_TPP 590 829 - -
Lan12g1073 843 Pfam Glycosyltransferase family 20 55 542 IPR001830 GO:0003824|GO:0005992
Lan12g1073 843 Gene3D Glycogen Phosphorylase B; 47 308 - -
Lan12g1073 843 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 841 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1073 Lan-Chr12 17278188 17281545 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1073 10 840 Trehalose Biosynthesis Gene Families AT2G18700 68.772 0.0 1202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1073 K16055 - gmx:100810498 1393.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1073 12 17278188 17281545 Lan1g0345 1 2561488 2564774 LSH