Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1067 ATGGTGTCTCATTCCCCTGCTAAAATACTCATTGGCCTCCCCTTAGACCCAGATGACAGCAAAGAGATTCTGTCTTGGGCAATAAGAGTTCTAGCCAATCCAAATGATACCATTGTGGCTGTGCATGTTCTTGTTGCTAAGGATAAGGATAACGAGAAACGAGTCTCAGTCAGAAGAAGGATCTCACAAATTAGGAAAGCGAAAGCATATGTTATATCTGTGCTTGGAGAATTCGCACAAACATGTTGGTCTAATCAGGTTGATTTGGAAGCCAAAGTGGTACTCAGTTCCAAAGTAGGCCGAGGATTAGTGCAGGAAGCCAAGTCCATTTCTGCTGAATTTCTTCTTCTTTGTGGCTCAAGAAACCAAAGAAATAAAAATGGAAATTATAAAGGAATCACCAAGTATTGCTTTGAGCATGCACATGAAGGCTGTTCAGTGGTCTCAGTTGGGAGATCTAAAAAGGCAGACCAAATTACACATTCAAATTCAACACATTCTCTAGATAATCATCAACAGAGTTCAAGGCGGCCAAAGATTGATCACCAAGTTGACGAGGCTGCGAGCAGTTCACCGATAACTGTACTAGATGCACTTGAGGGACAATCTAACAGCACCGAAGATGATACCTTTAGCACTAGGGTGTCAAGCATTACAGATACCCCTTCAATGACATCAAAGATTAAGAGCCAATCCAAGTTAAGAAGATCTCAATCCCCATTTAGGCTAATTTTGTCCTTCCTTGGTTCATCATTCAGAAGAAAAAACTTCAACACATCCAAAAATGAAAAGCATCAGCCTTTGTTGAAGTGCTTCACCTATGAACAAATATCCAATGCTACTAATGACTTCCATCAAGATAACTTGGTAGGACGAGGAGGGTACTCGGAAGTATACAGAGGTGATCTTTGTGATGGAAGAACTATTGCTGTGAAGAGATTGGCCAAGGACAACAACAACCCTAACAAGGAAAAGGAGTTCCTTATGGAATTAGGTGTTATTGGACATGTATGCCATCCTAATACTGCAGCTTTAGAGGGATGCTGCATTGAAAATGGGCTCTATCTGATTTTCAAGTACTCTCAGAATGGAAACTTGTCTACTGCATTGCATGGTAAAGCAGGAAATTCACTTGATTGGCCTATCAGATACAGAATTGCACTAGGAGTTGCAAGGGGTCTCAATTATCTTCATAAATGTTGCAAACACCGAATAATTCATCGCGACATTAAAGCCTCTAATGTTCTTCTGGGTCCTGATTACGAACCACAGATAACCGATTTTGGGCTAGCAAAGTGGCTTCCAAACAAGTGGACTCACCATGCTGTAATTCCTGTGGAGGGCACGTTTGGGTACTTAGCACCAGAGTGCTTTATGCATGGAATTGTAGATGAGAAAACAGATGTTTTTGCATTTGGAGTTCTGCTTATGGAGATTGTAACTGGAAGAAGACCTGTTGATTCTTCCAAGAGAAATCTTCTCCTATGGGCAAAACCTTTCATGGAGTCAGGGAATATTGCTGAGTTAGCTGATCCAAAATTGGAAGGTAAATATGATGAAGATCAACTGCATAGAGTAATACTAACGGCTTCATACTGTGTGAGACAAACTGCCACGTGGCGCCCACCAATGAGCGAGGTGTTAGAACTTCTAACTAGTGGCCAAGACTGTGAGGCTGGAAAAAGCTGGAGGATCCCAAAGTTCAGTTCTGATGACTTAGATGATTACTCAATGGTTTTTGGATATGATGTCCCCTCAGCCATATCTTTGGAGCATTTTTTGATAGAATAA 1791 0.4132 MVSHSPAKILIGLPLDPDDSKEILSWAIRVLANPNDTIVAVHVLVAKDKDNEKRVSVRRRISQIRKAKAYVISVLGEFAQTCWSNQVDLEAKVVLSSKVGRGLVQEAKSISAEFLLLCGSRNQRNKNGNYKGITKYCFEHAHEGCSVVSVGRSKKADQITHSNSTHSLDNHQQSSRRPKIDHQVDEAASSSPITVLDALEGQSNSTEDDTFSTRVSSITDTPSMTSKIKSQSKLRRSQSPFRLILSFLGSSFRRKNFNTSKNEKHQPLLKCFTYEQISNATNDFHQDNLVGRGGYSEVYRGDLCDGRTIAVKRLAKDNNNPNKEKEFLMELGVIGHVCHPNTAALEGCCIENGLYLIFKYSQNGNLSTALHGKAGNSLDWPIRYRIALGVARGLNYLHKCCKHRIIHRDIKASNVLLGPDYEPQITDFGLAKWLPNKWTHHAVIPVEGTFGYLAPECFMHGIVDEKTDVFAFGVLLMEIVTGRRPVDSSKRNLLLWAKPFMESGNIAELADPKLEGKYDEDQLHRVILTASYCVRQTATWRPPMSEVLELLTSGQDCEAGKSWRIPKFSSDDLDDYSMVFGYDVPSAISLEHFLIE* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1067 596 Gene3D Phosphorylase Kinase; domain 1 248 360 - -
Lan12g1067 596 MobiDBLite consensus disorder prediction 156 171 - -
Lan12g1067 596 ProSiteProfiles Protein kinase domain profile. 284 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1067 596 SUPERFAMILY Protein kinase-like (PK-like) 257 551 IPR011009 -
Lan12g1067 596 PANTHER OS08G0249100 PROTEIN 6 584 - -
Lan12g1067 596 MobiDBLite consensus disorder prediction 156 232 - -
Lan12g1067 596 Gene3D Transferase(Phosphotransferase) domain 1 362 564 - -
Lan12g1067 596 Pfam Universal stress protein family 13 142 IPR006016 -
Lan12g1067 596 ProSitePatterns Protein kinases ATP-binding region signature. 290 312 IPR017441 GO:0005524
Lan12g1067 596 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 8 148 - -
Lan12g1067 596 Gene3D HUPs 2 150 IPR014729 -
Lan12g1067 596 CDD USP_Like 8 150 - -
Lan12g1067 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
Lan12g1067 596 SMART serkin_6 284 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g1067 596 PANTHER OS08G0249100 PROTEIN 6 584 - -
Lan12g1067 596 MobiDBLite consensus disorder prediction 187 232 - -
Lan12g1067 596 Pfam Protein tyrosine and serine/threonine kinase 286 549 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1067 Lan-Chr12 17216448 17219775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1067 272 583 Trihelix Transcription Factor Family AT1G70460 39.394 1.24e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lan12g1067 PK_Tyr_Ser-Thr 2.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1067 - - ccaj:109809416 964.911