Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g1057 ATGCAGAGGCCTACGAGGGACCCAAATAGTAACAGTATGGGGAAAAGGTCACTGGAAGGTGGTGGAGAAGATGACCAGCCTGAAAGAAAAAGGCCTGGTCTTGCTAGTGTAATTGTGGAAGCTCTCAAGGTGGACAGTTTGCAGAAACTTTGCTCATCTTTAGAACCTATTCTTCGCCGAGTTGTTAGTGAAGAAGTGGAGCGTGCTCTGGCAAAGTTAGGTCCTGCAAGACTTAGTGGGAGGTCTTCCCCAAAAATGATTGAAGGTCCAGATGGTAGAAACTTGAGGCTGCATTTTAGGTCCCGACTGTCTCTTCCCCTGTTCACTGGAGGCAAAGTGGAAGGCGAGCAGGGGGCTCCAGTACATGTTGTTTTGATTGACACCAATACTGGAAATATTGTAATATCTGGACCTGAAGCCTGCATGAAACTTGACGTTGTTGTCCTTGAAGGTGATTTTAATAATGAAGATGATGAAGATTGGACTCAAGAAGAATTTGAAAGCCATGTGGTGAAAGAACGCGAAGGAAAGAGACCTCTATTGACTGGGGAGTTGCAAGTGACTCTCAAGGAAGGAATTGGAACATTGGGGGAACTGACCTTTACAGACAATTCAAGCTGGATAAGGAGCCGGAAATTCAGGCTTGGCCTGAAGGTTGCATCAGGTTTTTGTGAGTCCATACGCATCCGTGAAGCTAAGACAGAGGCTTTCATTGTTAAAGATCATAGAGGAGAATTATATAAGAAGCATTATCCTCCTGCTTTGACTGATGAAGTTTGGAGATTGGAGAAGATAGGCAAGGATGGGTCATTTCACAAGAAGCTGAATTATGCTGGAATATGCACAGTTGAACAATTCCTTCGGCTTGTGGTTAAAGATTCGCAGAAATTGCGGAATATCCTTGGGAGTGGTATGTCAAATAAGATGTGGGAAGCTCTCTTAGATCATGCAAAGACCTGTGTCTTAACCGGGAAGCTTTATGTTTATTACCCAGAAGATACAAGAAACATTGGTGTTATTTTTAACAACATCTATGAGCTGCGTGGCCTTATAGCAGGAGAACAATTCTTTTCTGCTGATTCTCTCACTGATAGCCAGAAGGTTTATGTTGATTCCTTGGTGAAGAAGGCATATGAAAATTGGGATCAGGTTATAGAGTATGATGGCAAATCACTTGTGAGTGTTGGGGAAAATAATGTTGTAGCTGACAGTGAACTTCAAATTGAGTTAATTGATTACACTAGTGGTTTCGATCATCAACTGCATTTGCCAGTGCTCCCAGCGTGTGTTCCTTCTGAAGATCAAATGAGTTCCGGGATGTCAGTTGGAGGTTATAACGATCATATGGTAACAAGATATCCTGGGCAGTCACTGATAGAAAGTTCCAGCGCACAGAACCAGTTTGACAGCTCATTATATCTGTCTAATGACCAGTTAATCAACAATACTCAACACAGCCAACCCACTAGAAATGGCCGTGGTGCAATTGGGTTAGCTCTTGGTCCTCTTCAACCATCAACATCAGGGTTTCTTGCTGGCAGCTCTTCTATTCAGCCATCTACTACCAATCCTTTTGATGATTGGTCACACAACAGGGATAAGGGGGTCAATGAATTCTTTTCTGAGGATGAAATCCGCCTCAGAAGTAATGAGATGCTAGAAAATGAAGATATGCAGCACTTGCTTCGCCTCTTAAGCATGGGAGGTAATTCCTCCATGAATGCTGAGGATGGCTATTCATTCCAATCATTCATGCCGTCACCTATGCCAAACTTTGATGAGGATCGCTCTCGTCCAGGCAGAGCTGTTGTGGGATGGCTAAAGATCAAGGCAGCAATGAGGTGGGGCTTTTTTATCAGGAAAATAGCAGCTGAGAAGCGGGCACAAATAGAGGAGTTAGATGAATAG 1908 0.4355 MQRPTRDPNSNSMGKRSLEGGGEDDQPERKRPGLASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARLSGRSSPKMIEGPDGRNLRLHFRSRLSLPLFTGGKVEGEQGAPVHVVLIDTNTGNIVISGPEACMKLDVVVLEGDFNNEDDEDWTQEEFESHVVKEREGKRPLLTGELQVTLKEGIGTLGELTFTDNSSWIRSRKFRLGLKVASGFCESIRIREAKTEAFIVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKKLNYAGICTVEQFLRLVVKDSQKLRNILGSGMSNKMWEALLDHAKTCVLTGKLYVYYPEDTRNIGVIFNNIYELRGLIAGEQFFSADSLTDSQKVYVDSLVKKAYENWDQVIEYDGKSLVSVGENNVVADSELQIELIDYTSGFDHQLHLPVLPACVPSEDQMSSGMSVGGYNDHMVTRYPGQSLIESSSAQNQFDSSLYLSNDQLINNTQHSQPTRNGRGAIGLALGPLQPSTSGFLAGSSSIQPSTTNPFDDWSHNRDKGVNEFFSEDEIRLRSNEMLENEDMQHLLRLLSMGGNSSMNAEDGYSFQSFMPSPMPNFDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAEKRAQIEELDE* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g1057 635 PANTHER OS02G0177800 PROTEIN 9 634 IPR012416 GO:0005516
Lan12g1057 635 PANTHER CALMODULIN-BINDING PROTEIN 60 B 9 634 - -
Lan12g1057 635 MobiDBLite consensus disorder prediction 1 16 - -
Lan12g1057 635 MobiDBLite consensus disorder prediction 1 32 - -
Lan12g1057 635 Pfam Calmodulin binding protein central domain 255 320 IPR046830 -
Lan12g1057 635 Pfam Calmodulin binding protein-like N-terminal domain 95 242 IPR046831 -
Lan12g1057 635 Pfam Calmodulin binding protein C-terminal domain 325 387 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g1057 Lan-Chr12 17151659 17158038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g1057 7 630 Calmodulin-binding Proteins AT5G57580 66.250 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g1057 - - gmx:100790087 1063.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1057 12 17151659 17158038 Lan1g1212 1 22029982 22036700 LSH
Lan12g1057 12 17151659 17158038 Lan1g0357 1 2701309 2707728 LSH