Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0994 ATGGAGGAAATAACTTCAGCTGTTGCAGTACCATTTACACTTAAGAATCTAAATCAAAGGGAGTCTTCAGTGAAGACCCACATGGAGATAAAGCTTATGGCAAATACAGCAGCAACTTTAATATCAAATCCTTCAGTAGAGGGTAATTGTCAATCCTCCTATTCTGTTGCAAGTGAAAATCATGCAGATGTTAGACTACAACACCAAATTACAGTATCTGCTGAGGTAAAGGAGAATCTAGCTGGATCTGCGCTTGTCTCGGAAGTGGTTATTCAATGTGACAGTAATTGGATCTTGACTGAAAACCATAACCAGCCAAGAAAGGAAGATGAACTCATGTTAGCTGTGGGTTTTCATTGTTTACATAATGATAAAAGGAATCCTTCTGAGGAGAAATCTGCTTATTCTGAAATAGATTCACCAATTATTACCAAGGTTGGTGATAATAACATACATGGTAAGTCAGTGCAGGACATAGTTTCTGTTGCAGTGGATGTTGAGATTGAGGATCAAAGTGGATCAGATGGGTCTGATCCAAAACCATCTTCTGTGCTTCTTGATCAGTTGCCAGAAGAAAAGAAAACAAGCTACCAGAATGCTTTGGACACGAGTCGTGGCCCTCTCTATGGTTCTTCATCGATCTGTGGAAAAAGAAAGGAGATGGAAGATGCTATTGCTCTTAAGCCTCAACTCTTTGAAGTCTCTTCCAAGATGCTAACTGATGACCGGGTGAATGGAGACACAAAATACTCACTAGCCCACTTTTTTGGTGTCTTTGATGGACATGGAGGCTTTCAGGTTGCCAATTACTGCCGGGAACGTCTTCATTCAGCATTGATTGAGGAGATAGAAGCTGAGCAAGCAAGATTGTCTGAAACAACTAGTGGAGATGATTGGCAGGATCATTGGAAGAAAGCATTATGGAATTGTTTTCAGAGAGTAGATGACGAGGTTGGAGGAATTCGTACAGGGAATAGTGAAAACAACGGCGGCGGATCTCAGACTAATGTTGAACCTCTTGCTCCTGATACTGTTGGTTCCACTGCTGTGGTTGCTATTTTAAGCCAATCACACATAATAGTTGCAAATTGTGGGGATTCAAGGGCTGTTTTATATCGTGGAAAAGAAGCCCTGCCATTATCTGTTGACCACAAACCAAATAGAGAGGATGAGTGGGCAAGGATAGAAGCTGCAGGAGGAAGGGTCATAAATTGGAAAGGATACCGAGTTCTTGGTGTTTTGGCAATGTCAAGATCTATAGGGGACAGATACTTGAAACCATGCATAATTCCAGAACCAGAAGTCATGTTTGTGCAACGAGAGAAAAATGATGAGTGCCTTATTCTAGCTAGCGATGGTTTATGGGATGTAGTCACAAATGAAGAAGCATGCGAAGTTGCACGAAAGCGAATCCTTCTTTGGCACAAGAAGTATGGCAGCAATGGGTCAACCGGACCAAGCGAAGGAGGAGTTGATCCTGCAGCTCAACATGCTGCAGAGTATCTTTCTAGACTTGCCCTCCAAAGGGGGAGCCAAGATAACATCTCTGTAATTGTGATAGACTTGAAGGCTCAGAGAAAAATCAAGAGAAATCCATAA 1599 0.4196 MEEITSAVAVPFTLKNLNQRESSVKTHMEIKLMANTAATLISNPSVEGNCQSSYSVASENHADVRLQHQITVSAEVKENLAGSALVSEVVIQCDSNWILTENHNQPRKEDELMLAVGFHCLHNDKRNPSEEKSAYSEIDSPIITKVGDNNIHGKSVQDIVSVAVDVEIEDQSGSDGSDPKPSSVLLDQLPEEKKTSYQNALDTSRGPLYGSSSICGKRKEMEDAIALKPQLFEVSSKMLTDDRVNGDTKYSLAHFFGVFDGHGGFQVANYCRERLHSALIEEIEAEQARLSETTSGDDWQDHWKKALWNCFQRVDDEVGGIRTGNSENNGGGSQTNVEPLAPDTVGSTAVVAILSQSHIIVANCGDSRAVLYRGKEALPLSVDHKPNREDEWARIEAAGGRVINWKGYRVLGVLAMSRSIGDRYLKPCIIPEPEVMFVQREKNDECLILASDGLWDVVTNEEACEVARKRILLWHKKYGSNGSTGPSEGGVDPAAQHAAEYLSRLALQRGSQDNISVIVIDLKAQRKIKRNP* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0994 532 ProSitePatterns PPM-type phosphatase domain signature. 255 263 IPR000222 GO:0043169
Lan12g0994 532 SMART PP2C_4 198 520 IPR001932 -
Lan12g0994 532 SMART PP2C_SIG_2 239 522 IPR001932 -
Lan12g0994 532 Gene3D - 197 531 IPR036457 -
Lan12g0994 532 SUPERFAMILY PP2C-like 206 523 IPR036457 -
Lan12g0994 532 CDD PP2Cc 209 522 IPR001932 -
Lan12g0994 532 ProSiteProfiles PPM-type phosphatase domain profile. 208 522 IPR001932 -
Lan12g0994 532 PANTHER ALPHABET, ISOFORM E-RELATED 128 532 - -
Lan12g0994 532 Pfam Protein phosphatase 2C 209 515 IPR001932 -
Lan12g0994 532 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 128 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0994 Lan-Chr12 16656029 16659184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0994 136 532 PP2C-type Phosphatase Gene Family AT4G26080 53.827 1.08e-138 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0994 K14497 - gmx:100789207 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0994 12 16656029 16659184 Lan1g1281 1 22588481 22591453 LSH
Lan12g0994 12 16656029 16659184 Lan15g0160 15 1775698 1777913 PCT
Lan12g0994 12 16656029 16659184 Lan14g0129 14 1599237 1602080 PCT
Lan15g0160 15 1775698 1777913 Lan12g0994 12 16656029 16659184 PCT
Lan14g0129 14 1599237 1602080 Lan12g0994 12 16656029 16659184 PCT