Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0989 ATGTCTGCACCAGTGAACATCATTGTAGGTTCTCATGTCTGGGTTGAGGATCCCGTCCAAGCATGGGTTGATGCAGAAGTATCTAAAATCAATGGTGACAAAGTCCACGTTTGCACCACAGATGGGAAAACAGTTATATCAAATATCTCAAAGGTTTTCCCCAAGGATAATGAAGCCCCTCCCGGTGGTGTTGATGACATGACAAAACTGTCATACTTGCATGAACCAGGAGTTCTGCACAACTTGGCTGCTAGATATGAACTCAATGAAATCTATACATATACCGGAAATATCCTGATTGCAATAAACCCATTTCAAAGGTTGCCCCATCTATACGATACTCACATGATGGAACAATACAAAGGAGCTGGATTCGGAGAGTTGAGTCCTCATGTGTTTGCAGTTGCAGATGTTGCATACAGGGCAATGATCAATGAGGGAAAAAGCAACTCAATTTTGGTTAGCGGTGAGAGTGGGGCTGGTAAGACAGAAACAACAAAAATGCTCATGCGGTATCTTGCATATCTCGGTGGTCGTTCTGGAGTAGAAGGAAGAACAGTTGAACAACAAGTTCTAGAATCTAATCCAGTTCTTGAAGCATTTGGTAATGCCAAAACAATCAGAAATAATAATTCAAGTCGTTTTGGTAAATTTGTTGAGATACAATTTGACAACAAAGGAAGGATCTCTGGAGCAGCTATAAGAACTTATTTGTTAGAGAGGTCTCGTGTCTGCCAAATTTCAGACCCCGAAAGAAATTACCATTGTTTTTACTTTCTTTGTGCTGCACCAGCTGAGGAAAAAGAGAAGTACAAGTTGGGCAGTCCTAGCTCCTTCCATTACTTAAATCAATCCAAGTGCTGTGAGCTGGATGGAGTGGATGATGCACATGAATATCTTGCTACTCGAAGAGCCATGGATGTTCTTGGAATTAGTGAGGATGAGCAGGAGGCAATTTTTAGGGTTGTTGCAGCAATTTTGCACCTTGGGAACATTGAATTTGCAAAAGGAGAGGAATTCGACTCTTCTGTCATCAAAGATGAGAAGTCTAGATTCCATCTTAATGTTACCGCTGAGCTTCTTAAGTGCAATGCTACGAGCTTGGAAGACGCGCTTATCAAGCGTGTGATGGTAACACCTGAGGAAGTTATTACAAGAACTCTTGATCCTGATGCAGCTGTTGGTAGCAGGGATGCATTAGCTAAAACCATTTATTCACGTTTGTTTGATTGGCTTGTGGAGAAGATTAACAATTCAATTGGGCAAGATCCAAATTCAAAATCTATCATTGGAGTTCTTGATATCTATGGGTTTGAAAGTTTTAAGTTCAATAGTTTTGAGCAGTTCTGTATTAATTTTACAAATGAGAAGTTGCAACAACATTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATACACGAAAGAAGAGATCAATTGGAGTTACATAGAGTTTATTGACAACCAAGATGTTTTGGATCTCATTGAGAAGAAACCTGGAGGAATAATTTCACTTCTTGATGAAGCCTGTATGTTTCCTAAGTCTACACATGAAACGTTTGCTCAGAAGTTGTACCAGACATTCAAAAACAACAAGCGCTTTATCAAACCTAAACTTTCTCGGACTAGTTTTACAATATCTCATTATGCAGGGGAGGTGACTTACTTGGCTGATTTATTTCTTGACAAAAATAAGGATTATGTAGTCGCAGAACATCGAGATGTAATGACAGCCTCAGAATGCTCATTTGTGGCAAGTCTGTTCCCTCCTTCTCGAGATGATTCTTCAAAATCGTCCAAGTTCTCTTCCATTGGATCTCGCTTCAAGCTTCAACTTCAGTCTCTGATGGAGACCCTAAATTCCACAGAACCTCACTATATCAGATGTGTGAAGCCAAATAATGCTCTCAGGCCTTCTATTTTTGAAAATATCAATATCATGCAACAATTGCGCTGTGGTGGTGTTCTTGAGGCAATTAGAATTAGCTGTGCTGGATATCCTACCAGACGGACCTTTTATGATTTTCTTAACCGATTTGGTGTCCTTGCACCTGAAATCCTGGATGGAAACTCTGATGACAAGGTTGCATGCCAAATGATTCTAGATAAAATGGGTATGAAAGGCTCTCAGATAGGGAAGACAAAGGTTTTCCTAAGAGCTGGCCAAATGGCTGAGCTGGATGCAAGAAGAGCAAAAGTTCTTGGAAATGCAGCTAGAATCATACAGGGGCAAATACGTACCCATATTGCACGCAGAGAGTTCATTGAATTGCGACAAGCTGCAATTCGTGTGCAGTCTAATTTGCGAGGTATCCTTAGTTCTCTCTAA 2331 0.4024 MSAPVNIIVGSHVWVEDPVQAWVDAEVSKINGDKVHVCTTDGKTVISNISKVFPKDNEAPPGGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAGFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTIRNNNSSRFGKFVEIQFDNKGRISGAAIRTYLLERSRVCQISDPERNYHCFYFLCAAPAEEKEKYKLGSPSSFHYLNQSKCCELDGVDDAHEYLATRRAMDVLGISEDEQEAIFRVVAAILHLGNIEFAKGEEFDSSVIKDEKSRFHLNVTAELLKCNATSLEDALIKRVMVTPEEVITRTLDPDAAVGSRDALAKTIYSRLFDWLVEKINNSIGQDPNSKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINWSYIEFIDNQDVLDLIEKKPGGIISLLDEACMFPKSTHETFAQKLYQTFKNNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHRDVMTASECSFVASLFPPSRDDSSKSSKFSSIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPSIFENINIMQQLRCGGVLEAIRISCAGYPTRRTFYDFLNRFGVLAPEILDGNSDDKVACQMILDKMGMKGSQIGKTKVFLRAGQMAELDARRAKVLGNAARIIQGQIRTHIARREFIELRQAAIRVQSNLRGILSSL* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0989 776 Pfam Myosin N-terminal SH3-like domain 9 48 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan12g0989 776 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lan12g0989 776 PANTHER MYOSIN 6 774 - -
Lan12g0989 776 Gene3D - 667 733 - -
Lan12g0989 776 Gene3D - 11 56 IPR008989 GO:0003774|GO:0005524|GO:0051015
Lan12g0989 776 CDD MYSc_Myo11 76 720 IPR036018 -
Lan12g0989 776 Gene3D - 439 623 - -
Lan12g0989 776 Gene3D Kinesin motor domain 65 662 IPR036961 -
Lan12g0989 776 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan12g0989 776 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan12g0989 776 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan12g0989 776 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan12g0989 776 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan12g0989 776 PANTHER MYOSIN-17 6 774 - -
Lan12g0989 776 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan12g0989 776 ProSiteProfiles IQ motif profile. 758 776 IPR000048 GO:0005515
Lan12g0989 776 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Lan12g0989 776 ProSiteProfiles IQ motif profile. 737 761 IPR000048 GO:0005515
Lan12g0989 776 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 773 IPR027417 -
Lan12g0989 776 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan12g0989 776 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lan12g0989 776 Gene3D - 735 775 - -
Lan12g0989 776 Gene3D - 252 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0989 Lan-Chr12 16627043 16634371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0989 1 774 Myosins gene family AT1G08730 79.974 0.0 1328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0989 K10357 - gmx:100777802 1435.24