Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0983 ATGCTTACATGCATAACTCGTCCCAAGAAACCAGAGAGTGACTCAGTGAGTAAGCCTGACGATTCCGATGGAAACGCCGCTAAAAACCAAGCCGTCAAATCCCTCACTTCTCAGATAAAGGATATGGCGTTAAAAGCATCGGGGGCGTACAAGCACTGCGCTCCTTGTACAGGGCCACCGGCGCAGGGTGGTGGAATAAGGAGCAACACCGAATCGGACGCGGAGTCGGATCGATTCCGATGGTCGTACCGGAGAACTGGGAGCTCGAGCTCAACGAGGACGTGGGGGAAGGAAATGGAAGCGAGGCTGAAGGGGATATCGAGCGGGGAAGGGACGCCGAACTCCGCCAGTGGACGGCGAGGGGAGCCGGTGGTTTTGTTCGTGGAAGAGAACGAACCGAAGGAGTGGGTGGCGCAAGTGGAGCCTGGCGTTTTGATCACATTCGTATCACTTCCACGTGGCGGGAACGATCTAAAGCGTATACGGTTCAGTCGTGAGATGTTTAACAAATGGCAAGCTCAAAAGTGGTGGTCAGAGAACTATGACAAGGTCATGGAACTTTACAACGTCCAAAGGCTTAACCACCATGCTTTCCCTCTTCCAACGCCACCAAGGTCTGAGGATGAGAGCTCAAAGCTTGAATCAGCGGAAGCCAGCCCTGTAACACCTCCACTAACAAAGGAACGGATCCCTCGTACTTTATACCGTCCACCAGGGATGGGAATGGGATATTCATCGTCAGATTCTTTTGATCATCAATCAATGCACTCCCGGAATTTCATGGACTGGACGACTGGCATGAGCTCAACCCCTAAAGTCTCCACTATTAGTACGGCTAAAACAGAGTTATCATCAATGGATGCTTCTATCATAAGTAGCTCATCCAGAGATGCTGATCGCTCTTGTGATCTATCAATCAGCAATGCTAGTGATTTGGAGAGTGAATGGGTTGAACAGGATGAACCTGGGGTTTACATTACCATCAAAGCATTGCCAGGTGGCAAAAGGGAGCTCAAACGAGTCAGGTTCAGCCGAGAAAAATTCGGGGAGGTGCATGCTAGATTATGGTGGGAGGAGAACCGTGCAAGAATACATAAACAATATTTGTGA 1110 0.5018 MLTCITRPKKPESDSVSKPDDSDGNAAKNQAVKSLTSQIKDMALKASGAYKHCAPCTGPPAQGGGIRSNTESDAESDRFRWSYRRTGSSSSTRTWGKEMEARLKGISSGEGTPNSASGRRGEPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQKWWSENYDKVMELYNVQRLNHHAFPLPTPPRSEDESSKLESAEASPVTPPLTKERIPRTLYRPPGMGMGYSSSDSFDHQSMHSRNFMDWTTGMSSTPKVSTISTAKTELSSMDASIISSSSRDADRSCDLSISNASDLESEWVEQDEPGVYITIKALPGGKRELKRVRFSREKFGEVHARLWWEENRARIHKQYL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0983 369 MobiDBLite consensus disorder prediction 55 78 - -
Lan12g0983 369 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 369 - -
Lan12g0983 369 Pfam Transcription factor regulating root and shoot growth via Pin3 313 368 IPR013591 -
Lan12g0983 369 Pfam Transcription factor regulating root and shoot growth via Pin3 134 188 IPR013591 -
Lan12g0983 369 Pfam Transcription factor BRX N-terminal domain 25 56 IPR027988 -
Lan12g0983 369 ProSiteProfiles BRX domain profile. 134 189 IPR013591 -
Lan12g0983 369 ProSiteProfiles BRX domain profile. 314 369 IPR013591 -
Lan12g0983 369 MobiDBLite consensus disorder prediction 200 238 - -
Lan12g0983 369 MobiDBLite consensus disorder prediction 1 34 - -
Lan12g0983 369 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 369 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0983 Lan-Chr12 16585758 16590874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0983 1 369 Major Intrinsic Protein MIP AT1G31880 44.072 4.80e-91 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0983 - - gmx:100794109 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0983 12 16585758 16590874 Lan1g1291 1 22654028 22658415 LSH
Lan12g0983 12 16585758 16590874 Lan1g0423 1 3390637 3397075 LSH
Lan12g0983 12 16585758 16590874 Lan14g0122 14 1519395 1525312 PCT
Lan14g0122 14 1519395 1525312 Lan12g0983 12 16585758 16590874 PCT