Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0973 ATGGCAAACCCTGCATCCATGTACAATTTCATGAACCAACCTTCCTCTGATTCCAAACAAGGAAAACTCTCGGTTGTTTCTTCCATTCGCACATTCCAATGCAATTTCTGCCACCGCAAGTTTTACACTTCTCAAGCTCTCGGTGGCCATCAAAACGCTCATAAGCTTGAAAGAGCTGCTATTAGGAGAACCAACAATCTTTCATTCACACACAATAATGCTTCTACCTTGGATTTCAACACTTGTTCTTCTTTTGAACCTCCTCATCCTCATTTCTTTGGTGCCCATGCATCTTACTGGTTTCAAATGGAACAACCATTTCAGTTTCAGACCCATCATCACCAACACGTTGCACCAGTAAATACTACTGTTCCTGTTTCTTACCATGCTTCTGCTTCTACTTCTTCAACTTCTACTAACAATGCTTCTGCTTCTGATGCTTCTGATCATGTCAACCTCGACCTCACTCTTCGCCTGTGA 480 0.4229 MANPASMYNFMNQPSSDSKQGKLSVVSSIRTFQCNFCHRKFYTSQALGGHQNAHKLERAAIRRTNNLSFTHNNASTLDFNTCSSFEPPHPHFFGAHASYWFQMEQPFQFQTHHHQHVAPVNTTVPVSYHASASTSSTSTNNASASDASDHVNLDLTLRL* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0973 159 Gene3D Classic Zinc Finger 13 83 - -
Lan12g0973 159 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
Lan12g0973 159 MobiDBLite consensus disorder prediction 1 20 - -
Lan12g0973 159 PANTHER ZINC FINGER PROTEIN JAGGED 14 159 IPR045320 GO:0003700
Lan12g0973 159 PANTHER OS02G0182300 PROTEIN 14 159 - -
Lan12g0973 159 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Lan12g0973 159 SUPERFAMILY beta-beta-alpha zinc fingers 30 59 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0973 Lan-Chr12 16523887 16524366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0973 27 93 C2H2 Transcription Factor Family AT5G14010 56.716 1.78e-16 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lan12g0973 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0973 - - lang:109330395 198.749