Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0960 ATGGCCGCCGCTGTTCGCTTCCATTTTCATCTCTTTCTCCTCTCAACTGCACTTTCTTTCTCCCCTCTATTCTCTATTGATCCAGAAAACGAAGCACTCCTCAAACTTAAAAAATCTTTTGCTACCTCTGACTCTCTCTCTTCTTGGGTTCCAAACCAGAACCCATGTTCTTCAAAATGGGACGGTGTTATATGCAACAAAAATGCCATCACAAACCTTCACCTCACAGATAAAGGTCTCTCTGGAAAGATTGACATCGAAGCTCTTATGCAGATTCGTTCCCTTCGTTCTATTAGTTTAATCAATAACAATTTTTCAGGTCCAATGCCTGAGTTCAATAAACTCGGTGCTCTTAAAGCTATTTACTTAACCAAAAACCAATTCTCTGGTCCTATTCCTTCAGATTTTTTCTCTGGGTTAGGCTCCTTGAAGAAAATATGGATCTCCAATAACAAGTTCTCTGGAAAAATACCTGATTCGTTAAGAAAGCTGAAGTTTTTAAACGAGTTGCATCTCGAGAACAACGAGTTTTCAGGGCCTGTACCTGAGTTTGATCATGATATTAAATCTTTGGACATGTCAAACAATAAATTACAAGGTGCAATACCAGCTAGCATGGTGAAATTCGGTGCTAACTCCTTCTCTGGGAATGACGGGCTATGCGGGAAGCCATTGGATAAGGATTGCGAAGCTGGGCCAAACAGTGGGATGAGTTGGACCGTGAAGATTATCATTATCCTCGTTATTGCAGCTGTTGTAGCTATGGCTTTCATAGTCATGAAGTCAAGGCGTAGAAATGATGATGATTTTAATGCGAGGAGCAGTGAAAATCATCATCAGAACCAAAGGGTCAATGTGGTGCAAGTGCATGTTCCAAGCTCTGACCATAGTAGGGGCTCAGAACATAGCACCAAAAAGGGTGGTGAATCGAAGAAGGGTTCGTCGAGGAGTGGTGGCATGGGTGACCTTATCATGTTGAATGATGAAAAGGGTGTGTTTGGATTGCCGGATTTGATGAAGGCTGCGGCTGAGGTTTTGGGGAATGGTGGGTTGGGTTCGGCTTATAAAGCTGCCATGGCTAATGGGATGTCTGTGGTGGTGAAAAGGATGCGAGAGATGAATAAAGTTAGCAGAGACATTTTTGATGCTGAGATGAGAAGGTTTGGTAGGCTTAGACATCCTAATATTTTGACTCCTTTGGCTTACCATTACCGCAGAGAGGAGAAGCTATTTGTCACTGAATATATGCCTAAAGGAAGCTTGTTATATGTCTTGCATGGTGATAGAGGGATGAGTCATGCTGACCTGAACTGGCCTAACCGTTTGAATATTGTGAAGGGAATTGCAAGAGGGTTGGGCTTCCTTTATTCTGAATTTTCATCAGAGGATTTACCACATGGGAACCTTAAGTCTAGCAACGTTCTACTAACCGAAAATTATGAACCACTTCTTAGTGATTTTGCCTTTCATGCACTCATGAATCCTAGCTATTCTGTACAGACATTGTTTGCTTACAAAACTCCTGATTATGTACAATACCAAACCGTTTCGCAGAAGACAGATGTTTATTGCCTTGGCATTATTATTCTTGAGATGATAACAGGGAAATTCCCTTCTCAGTATCACAGTAATGGCAAGGGTGGAACTGATGTAGTGCAATGGGTCTTCACATCAATTTGTGATAGAAAAGAGGAGGAATTGATTGATCCAGAGTTAAAGAGCAATAAAAGTTCACTCAATCAAATGATGCAACTTCTACAAGTTGGGGCTGCTTGCACAGAAAGCAATCCTGAACAAAGACTTAGCATGAAAGAAGCCATTAGGAGGGTAGAGGAGGTACAAGTTTAA 1848 0.4156 MAAAVRFHFHLFLLSTALSFSPLFSIDPENEALLKLKKSFATSDSLSSWVPNQNPCSSKWDGVICNKNAITNLHLTDKGLSGKIDIEALMQIRSLRSISLINNNFSGPMPEFNKLGALKAIYLTKNQFSGPIPSDFFSGLGSLKKIWISNNKFSGKIPDSLRKLKFLNELHLENNEFSGPVPEFDHDIKSLDMSNNKLQGAIPASMVKFGANSFSGNDGLCGKPLDKDCEAGPNSGMSWTVKIIIILVIAAVVAMAFIVMKSRRRNDDDFNARSSENHHQNQRVNVVQVHVPSSDHSRGSEHSTKKGGESKKGSSRSGGMGDLIMLNDEKGVFGLPDLMKAAAEVLGNGGLGSAYKAAMANGMSVVVKRMREMNKVSRDIFDAEMRRFGRLRHPNILTPLAYHYRREEKLFVTEYMPKGSLLYVLHGDRGMSHADLNWPNRLNIVKGIARGLGFLYSEFSSEDLPHGNLKSSNVLLTENYEPLLSDFAFHALMNPSYSVQTLFAYKTPDYVQYQTVSQKTDVYCLGIIILEMITGKFPSQYHSNGKGGTDVVQWVFTSICDRKEEELIDPELKSNKSSLNQMMQLLQVGAACTESNPEQRLSMKEAIRRVEEVQV* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0960 615 SUPERFAMILY Protein kinase-like (PK-like) 344 610 IPR011009 -
Lan12g0960 615 SUPERFAMILY L domain-like 29 209 - -
Lan12g0960 615 ProSiteProfiles Protein kinase domain profile. 340 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0960 615 Gene3D Phosphorylase Kinase; domain 1 346 416 - -
Lan12g0960 615 MobiDBLite consensus disorder prediction 295 312 - -
Lan12g0960 615 Pfam Protein kinase domain 344 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0960 615 Gene3D Ribonuclease Inhibitor 26 185 IPR032675 -
Lan12g0960 615 Gene3D Ribonuclease Inhibitor 189 226 IPR032675 -
Lan12g0960 615 Gene3D Transferase(Phosphotransferase) domain 1 417 615 - -
Lan12g0960 615 MobiDBLite consensus disorder prediction 277 294 - -
Lan12g0960 615 PANTHER LRR RECEPTOR-LIKE KINASE 10 615 - -
Lan12g0960 615 Pfam Leucine rich repeat N-terminal domain 28 66 IPR013210 -
Lan12g0960 615 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 615 - -
Lan12g0960 615 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Lan12g0960 615 MobiDBLite consensus disorder prediction 269 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0960 Lan-Chr12 16455235 16458285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0960 9 615 Receptor kinase-like Gene Family AT3G42880 51.108 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan12g0960 Pkinase 6.5e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0960 - - gmx:100816925 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0960 12 16455235 16458285 Lan1g1314 1 22843434 22846297 LSH
Lan12g0960 12 16455235 16458285 Lan15g0185 15 1991177 1994883 PCT
Lan15g0185 15 1991177 1994883 Lan12g0960 12 16455235 16458285 PCT