Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0954 ATGCAAACCCATCACACTCTCACACTGTTTTCTTTCTTCCTCTTGTTCCTATCACTCTCAGAAGCAAGAACACTACCACCACAAGATCTTCTCCATTCATCATGCACTCATTCCAGATACCCCACCCTCTGCCTCCAAACCCTCTCCACCTTCACAGGACCCACCAAAACCACTCTAAACCTGGCTCAAGCCGCAATCCAAGTAAGCCTCACCCACGCACGCGCCCTCTCCTCTTACCTCAACACCCTACACCCACAACCACCATCAAACAAGAGGAACCAAGTTGCACTAAGTGACTGCGCTAAACAGATATCTGACTCGGTTGATGAGTTGAGCAAGACTCTGAACGAGTTACAGCATCTTCACATGGGAACTTTTCAGTGGCAGATGAGTAACGCTGAGACATGGGCTAGCACCGCCTTGACCAACGGTGATATCTGCCTTAACGGTTTCAACGACGGCGGAGATAGGAAGATGATGGTGGAGGTGAAGCGGAGGGTCAATGATGTAGCCATGCTCACTAGCAATGCGCTATACTTCATTGATCGCGTTGGTCAAACTAGAAGTGGAAAGCCTCATGTTAATCCCTAA 591 0.4907 MQTHHTLTLFSFFLLFLSLSEARTLPPQDLLHSSCTHSRYPTLCLQTLSTFTGPTKTTLNLAQAAIQVSLTHARALSSYLNTLHPQPPSNKRNQVALSDCAKQISDSVDELSKTLNELQHLHMGTFQWQMSNAETWASTALTNGDICLNGFNDGGDRKMMVEVKRRVNDVAMLTSNALYFIDRVGQTRSGKPHVNP* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0954 196 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 6 190 - -
Lan12g0954 196 CDD PMEI-like_3 33 183 - -
Lan12g0954 196 Pfam Plant invertase/pectin methylesterase inhibitor 30 178 IPR006501 GO:0004857
Lan12g0954 196 SMART PMEI_2 26 180 IPR006501 GO:0004857
Lan12g0954 196 PANTHER PECTINESTERASE INHIBITOR-LIKE 6 190 - -
Lan12g0954 196 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 183 IPR035513 -
Lan12g0954 196 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 182 IPR006501 GO:0004857
Lan12g0954 196 Coils Coil 101 121 - -
Lan12g0954 196 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 184 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0954 Lan-Chr12 16396627 16397424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0954 20 187 Carbohydrate Esterase AT3G14310 30.387 4.24e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0954 - - gmx:100810705 205.682