Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0952 ATGGAAGATGCCGGAGGCTCGAAATTGAAGGCACTTGGGCAAATTGCGAGGCTAAAGGAAATGTTTCAGAAATGGCAAACTACCACTGTGGGCTCAAAAGAATTCGATGACCACTCTCATGTGAATCATGGGGGCATATCGCCAATGATTAACAAAAGGCTAACAAATCTTGTGTATTGTGACTCGGATGAGGAAAACTGCTACAGCCCTGAAGCGCCACATGATGTTCCCAAAGGATACTTGGCAGTCTATGTCGGGCCAGAGCATCGGAGGTTCATCATTCCCACCAGCTACCTTAGCCACTCTCTGTTCAAAGTGTTGCTGGAAAAGGCTGCAGAGGAGTTTGGGTTTGACCAATGTGGGGGATTAACAATCCCATGTGAGATTGAGACGTTCAAATACCTTCTGAATTGCATGGAGAACAATCAGAAGGAGGATCATGATGACACCACTGGAAATACAGGAGCCATATAA 474 0.4599 MEDAGGSKLKALGQIARLKEMFQKWQTTTVGSKEFDDHSHVNHGGISPMINKRLTNLVYCDSDEENCYSPEAPHDVPKGYLAVYVGPEHRRFIIPTSYLSHSLFKVLLEKAAEEFGFDQCGGLTIPCEIETFKYLLNCMENNQKEDHDDTTGNTGAI* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0952 157 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 148 IPR003676 GO:0009733
Lan12g0952 157 Pfam Auxin responsive protein 62 138 IPR003676 GO:0009733
Lan12g0952 157 PANTHER SMALL AUXIN-UP RNA-RELATED 9 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0952 Lan-Chr12 16381886 16383834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0952 1 152 Calmodulin-binding Proteins AT5G20810 65.385 6.41e-68 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0952 K14488 - gmx:100795275 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0952 12 16381886 16383834 Lan1g0454 1 3699717 3701699 LSH
Lan12g0952 12 16381886 16383834 Lan15g0194 15 2116625 2119339 PCT
Lan12g0952 12 16381886 16383834 Lan14g0095 14 1277970 1281181 PCT
Lan15g0194 15 2116625 2119339 Lan12g0952 12 16381886 16383834 PCT
Lan14g0095 14 1277970 1281181 Lan12g0952 12 16381886 16383834 PCT