Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0943 ATGGCATCAAGAATGCATGCAACAATCTTGTTGATGACTTGCTTTGTATTGTTGGCTCAATGTGCCAAGCTAGAAAACACAGAAGAAAAGGGAAATGATTTGATTACTGAAACATGCAAAAACACCCTTCATTCTCAAACATGTATTTCTTCCTTAACATCTGTTCCTGGTAGCAACACAGCAGATCCTAAAGGGCTAGCTAAGATTGCAATAAATGTAACCTTAGCAGAAGGGTCAAAGATATTAGCCTATGTTCATGAACTAAAATCCTCTGATGAAAGTAAAAAGAGTGATATATCAAGTGTCTTAAATGATTGTGATGAGGAATATACAGAAGCTATGGAGAATTTGAAGGAATCAGCAACAGCACTTGATAAAGGAGATTATAAAAAAGTTAATATGTTATTATCAACTGCTATGACAAATGGTAACACATGTGAGGAAGGTTTTAAGGATTTGGAGATAACTTCTCCTCTTACTAAACGCAATAGTTACTTCTCTGAACTGTGTAGTAATGTTCTAGCCATTACAAAACTATTGGCCTGA 546 0.3516 MASRMHATILLMTCFVLLAQCAKLENTEEKGNDLITETCKNTLHSQTCISSLTSVPGSNTADPKGLAKIAINVTLAEGSKILAYVHELKSSDESKKSDISSVLNDCDEEYTEAMENLKESATALDKGDYKKVNMLLSTAMTNGNTCEEGFKDLEITSPLTKRNSYFSELCSNVLAITKLLA* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0943 181 Pfam Plant invertase/pectin methylesterase inhibitor 33 176 IPR006501 GO:0004857
Lan12g0943 181 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 180 IPR006501 GO:0004857
Lan12g0943 181 CDD PMEI-like_1 34 180 - -
Lan12g0943 181 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 181 IPR035513 -
Lan12g0943 181 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 180 IPR035513 -
Lan12g0943 181 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 180 - -
Lan12g0943 181 PANTHER OS05G0360900 PROTEIN 14 180 - -
Lan12g0943 181 SMART PMEI_2 30 176 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0943 Lan-Chr12 16309139 16310397 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0943 30 176 Carbohydrate Esterase AT5G53370 30.769 8.71e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0943 - - aprc:113848191 186.422