Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0932 ATGGCCACCGAGGCCAACTTCGATGATGGTATTAGTCCAAGTGAGATGATAGGATCAGCAAGTAATCCTCAAGTTCCTGGTCTTGAAAATACTGAAGAAATGAAAAGGAGGCTGCAGGATTCGAAGAGAAACAAGGAGAAGAAAGGAAGCAATAAAACAGTTTCGTTCTATAAGCTTTTCTCATTTGCAGATTCTTGGGATCATCTAATGATGTTTATTGGGACAATAAGTGCTGTTGCGAATGGAATATCATTCCCTCTAATGACTATAATTATTGGAGATACAATTGATGCTTTTGGAGGAAATGCTAACACTACACAAGTAGTTCATGAAGTTTCCAAGGTATCTCTGAAGTTTGTATACATGGGTGCTGGTGCCTTTGTGGCAGCGTTTTTGCAGGTGTCTTGCTGGGTGATCACCGGGGAGAGACAAGCTGCAAGAATAAGAGGCTTATACCTCAAAGCAATTTTGAGGCAAGATGTTAGCTTCTTTGACAAGGAAACTAACAGTGGTGAGGTTGTTGGAAGGATGTCGGGTGACACAGTTCTTATTCAAGATGCCATGGGTGAGAAGGTAGGAAAGTTCATACAGTATGTGGCAGCTTTTTTAGGAGGCTTTGTCATAGCATTCATCAAGGGATGGCTTCTAAGCCTTGTATTGCTATTTTCAGTTCCACCACTAGTCTTCGGTGGTTATCTAATGACCTTTGCTTTCGTAAAGATGGCATCCCGTGGACAAGCAGCTTATTCGGAGGCAGCATCTGTAGTAGAGCGTACAATTGGTTCAATTCGAACTGTTGCATCATTTACCGGTGAGAAACAAGCTATAGCTCAATACAATCAATCCTTGAACAAAGCTTACAGGATTGGTGTGCAAGAGGGAGTGGCTGCTGGTTTTGGCCTTGGCTCACTTCGTTTATTTGCTTATAGTAGTTACGCATTGGCTATATGGTATGGAGGGAAGATGATACTAGAGAAAGGATATACAGGAGGTGAAGTCATAAGTGTATTTTTTGCACTATTGACTGGATCCTTGTCACTGGGGCAGGCATCTCCAAGCTTAACTGCTTTTGCTGTGGGACAAGCTGCAGCCTTTAAAATGTTTGAAACAATAAAGAGGCAGCCAGATATTGATGCTTACGAGACCGATGGTCGGCGTTTAGATGATATTGATGGAGATATAGAATTTAAGGAGGTTTGCTTTTGTTATCCTACAAGAACAGATGAATTGATATTCAATAAATTTTCTATTTCAATATCAAGTGGCACCACTGCAGCTTTGGTAGGACAAAGTGGGAGTGGGAAGTCAACAGTTATTAGTTTGATACAGAGATTTTATGATCCACAAGCTGGTGAAGTTCTCATTGATGGTATCAACCTCAGAGAATTTCAACTGAAATGGATCAGACAGAAAATAGGCCTGGTCAGCCAAGAGCCAGTTCTTTTTGCTTGTAGCATTAAGGAGAATATTGCATATGGTAAGGATGGTGCAACAAATGATGAAATCAGAGCTGCAGCAGAACTTGCTAATGCCGCTAAATTCATTGATAAATTTCCTCATGGGCTTGACACAATGGTTGGAGAGCATGGAGCTCAACTTTCTGGAGGTCAAAAGCAAAGGGTTGCTATAGCAAGAGCAATTCTGAAAGACCCAAGAATTCTACTCCTTGATGAAGCTACAAGTGCTCTAGATGCTGAATCTGAGAGAGTAGTGCAAGAGACACTGGACAGAATAATGATAAACAGAACAACTATCATTGTAGCTCACCGCTTAAGCACAATAAGGAACGCTGACATGATTGCTGTTATCAACCAAGGAAAAGTAGTAGAGAAAGGTTCTTATGCTGAGCTCACTGAAGATCCTGATGGAGCTTTTAGCCAGCTCATTAAATTACAAGAAATTAAAAGAGAGTCAAAACAAAATGGTGCAAATGAATCATGCAGTCAAGAAAACTTTGTAGATTCAGTACAACAATTGAGCCAAAGTTTTTCTTTAAGTCACGGATCATCTGGAACTGGAAACAGCAGTAGTCACTCGTTCAGAACATCAAATACTATGCCTACCAAATTTGCTCTATTGGAAAAATCAGAAGTTGTTCCTTCAGCTGCATTACATAAACCTCGACAAGTCTCATTTTTCCGCCTAGCTTGTCTTAACAAGCCTGAAATCCCAGTGTTACTCATAGGGACTCTGGCAGCAGCAGTAACCGGGGCAATATTACCAACTCTGGGTCTTCTTACATCGAACATGATAAATACTTTCTATGAGCCTGCAGATCAACTCCGTAAAGACTCAAAGTTTTGGGCATTAATCTTTATTGCCCTTGGTGTGACTGCCTTCTTATTTCATCCTTTGAGGTCATACTTTTTTTCTGTAGCTGGTTCTAAGTTGATAAAAAGGATCCGGCTAATGTGTTTTGAGAAAATAATTCACATGGAAGTAGGTTGGTTTGATAAAGCTGAGCATTCCAGTGGAGCACTTGGAGCAAGGCTGTCAACTGATGCTGCTTCTATTCGAGCTTTGGTTGGCGATGCACTTGGTTTGTTGGTTCAAGATATCGTTACAGCGATTACAGCCTTGGTAATCTCCTTTGAGGCAAATTGGCAGCTTTCTCTCATCGTTCTTGCGTTGCTACCTCTACTTTTAGTAAATGGACATGTGCAAATGAAATCCATGCAAGGATTCAGCACAGATGCAAAGAAACTATATGAGGAAGCAAGTCAAGTAGCAAATGATGCTGTGGGGAATATAAGAACAGTTGCTTCTTTCTGTGCTGAAGAGAAGGTGATGGAGTTATACCAGAAGAAATGTGAAGGACCAATCAAGACAGGTATAAGACAGGGCTTAGTCAGTGGAACTGGTTTTGGGTTATCACTCCTCTTTCTGTACTCCGTCTATGCATGCAGCTTTTATGCTGGAGCCAGACTTGTTGAGGATGGCAAAGCAGTAGCCTCGGATGTTTTCCGTGTATTTTACTGTCTCACAATGGCAGCTATAGCATTATCTCAATCCGGCTTCATGTCCCCGGGTATGACTAAAGCAAAAAGTTCTGCTGCTTCAATATTTGCTATTCTTGATCAGAAATCCAAAATAGATGCAAGTGAGGAGTCTGGAATGATATTGCAAGATGTGAAGGGGGATATTGAGTTCCACCATGTCACTTTCAAGTATCCAACCAGGCCTAATGTTCATATATTCAGAGATCTTTCCTTGTGCATTCATTCAGGAAAGACAGTTGCTCTAGTAGGGGAAAGTGGAAGTGGAAAGTCAACAGTGATCTCATTGTTGCAAAGATTTTATGACCAGGATTCAGGTCAGATTACACTAGATGGAATAGAAATACAAAAGCTACAACTTAAATGGTTTAGGCAGCAGATAGGCCTTGTAAGCCAGGAGCCTGTGTTGTTTAACGACACCATTCGAGCCAACATCGCATATGGAAAAGGAGGTGATGCAGCAGAGGCAGAAATTATAGCTGCAGCAGAACTGGCAAATGCCCACAAGTTCATTAGCTCTTTGCAAAAGGGGTATGATACAATAGTAGGGGAAAGAGGGATTCAACTATCTGGAGGGCAAAAGCAAAGGGTGGCAATTGCAAGAGCCATAGTGAAGAGTCCAAAAATAATACTACTTGATGAAGCTACTAGTGCACTTGATGCAGAGTCTGAAAAAATGGTCCAGGATGCATTAGACCGAGTGAGGGTGGATAGAACCACAATTGTGGCGGCACACAGATTATCCACCATAAAGGGTGCAGATTCAATTGCAGTGGTTAAAAATGGAGTCATTGCAGAGAAAGGAAAACATGAAAGTTTGGTCAACAAAGGTGGTATCTATGCTTCTTTAGTAGCACTTCACACTACTGCTCCTTCATCTTAG 3879 0.4135 MATEANFDDGISPSEMIGSASNPQVPGLENTEEMKRRLQDSKRNKEKKGSNKTVSFYKLFSFADSWDHLMMFIGTISAVANGISFPLMTIIIGDTIDAFGGNANTTQVVHEVSKVSLKFVYMGAGAFVAAFLQVSCWVITGERQAARIRGLYLKAILRQDVSFFDKETNSGEVVGRMSGDTVLIQDAMGEKVGKFIQYVAAFLGGFVIAFIKGWLLSLVLLFSVPPLVFGGYLMTFAFVKMASRGQAAYSEAASVVERTIGSIRTVASFTGEKQAIAQYNQSLNKAYRIGVQEGVAAGFGLGSLRLFAYSSYALAIWYGGKMILEKGYTGGEVISVFFALLTGSLSLGQASPSLTAFAVGQAAAFKMFETIKRQPDIDAYETDGRRLDDIDGDIEFKEVCFCYPTRTDELIFNKFSISISSGTTAALVGQSGSGKSTVISLIQRFYDPQAGEVLIDGINLREFQLKWIRQKIGLVSQEPVLFACSIKENIAYGKDGATNDEIRAAAELANAAKFIDKFPHGLDTMVGEHGAQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERVVQETLDRIMINRTTIIVAHRLSTIRNADMIAVINQGKVVEKGSYAELTEDPDGAFSQLIKLQEIKRESKQNGANESCSQENFVDSVQQLSQSFSLSHGSSGTGNSSSHSFRTSNTMPTKFALLEKSEVVPSAALHKPRQVSFFRLACLNKPEIPVLLIGTLAAAVTGAILPTLGLLTSNMINTFYEPADQLRKDSKFWALIFIALGVTAFLFHPLRSYFFSVAGSKLIKRIRLMCFEKIIHMEVGWFDKAEHSSGALGARLSTDAASIRALVGDALGLLVQDIVTAITALVISFEANWQLSLIVLALLPLLLVNGHVQMKSMQGFSTDAKKLYEEASQVANDAVGNIRTVASFCAEEKVMELYQKKCEGPIKTGIRQGLVSGTGFGLSLLFLYSVYACSFYAGARLVEDGKAVASDVFRVFYCLTMAAIALSQSGFMSPGMTKAKSSAASIFAILDQKSKIDASEESGMILQDVKGDIEFHHVTFKYPTRPNVHIFRDLSLCIHSGKTVALVGESGSGKSTVISLLQRFYDQDSGQITLDGIEIQKLQLKWFRQQIGLVSQEPVLFNDTIRANIAYGKGGDAAEAEIIAAAELANAHKFISSLQKGYDTIVGERGIQLSGGQKQRVAIARAIVKSPKIILLDEATSALDAESEKMVQDALDRVRVDRTTIVAAHRLSTIKGADSIAVVKNGVIAEKGKHESLVNKGGIYASLVALHTTAPSS* 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0932 1292 Gene3D - 392 645 IPR027417 -
Lan12g0932 1292 MobiDBLite consensus disorder prediction 1 47 - -
Lan12g0932 1292 MobiDBLite consensus disorder prediction 30 47 - -
Lan12g0932 1292 SUPERFAMILY ABC transporter transmembrane region 58 376 IPR036640 GO:0005524|GO:0016021
Lan12g0932 1292 Gene3D - 1039 1290 IPR027417 -
Lan12g0932 1292 Gene3D ABC transporter type 1, transmembrane domain 117 980 IPR036640 GO:0005524|GO:0016021
Lan12g0932 1292 CDD ABC_MTABC3_MDL1_MDL2 1048 1283 - -
Lan12g0932 1292 Pfam ABC transporter transmembrane region 726 992 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan12g0932 1292 Pfam ABC transporter transmembrane region 71 345 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan12g0932 1292 SMART AAA_5 421 593 IPR003593 -
Lan12g0932 1292 SMART AAA_5 1075 1268 IPR003593 -
Lan12g0932 1292 CDD ABC_6TM_Pgp_ABCB1_D2_like 718 1031 - -
Lan12g0932 1292 Pfam ABC transporter 413 561 IPR003439 GO:0005524
Lan12g0932 1292 Pfam ABC transporter 1067 1216 IPR003439 GO:0005524
Lan12g0932 1292 Coils Coil 28 48 - -
Lan12g0932 1292 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 72 358 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan12g0932 1292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1037 1285 IPR027417 -
Lan12g0932 1292 ProSitePatterns ABC transporters family signature. 533 547 IPR017871 GO:0005524
Lan12g0932 1292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 385 632 IPR027417 -
Lan12g0932 1292 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 34 1288 - -
Lan12g0932 1292 CDD ABC_MTABC3_MDL1_MDL2 394 632 - -
Lan12g0932 1292 CDD ABC_6TM_Pgp_ABCB1_D1_like 71 367 - -
Lan12g0932 1292 SUPERFAMILY ABC transporter transmembrane region 714 1028 IPR036640 GO:0005524|GO:0016021
Lan12g0932 1292 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 394 630 IPR003439 GO:0005524
Lan12g0932 1292 MobiDBLite consensus disorder prediction 663 682 - -
Lan12g0932 1292 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1048 1285 IPR003439 GO:0005524
Lan12g0932 1292 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 727 1013 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lan12g0932 1292 PANTHER - 34 1288 - -
Lan12g0932 1292 ProSitePatterns ABC transporters family signature. 1188 1202 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0932 Lan-Chr12 16227834 16234264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0932 45 1286 Calmodulin-binding Proteins AT2G36910 42.937 0.0 1017
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0932 K05658 - gmx:100777713 1949.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0932 12 16227834 16234264 Lan12g0932 12 16227834 16234264 ECH