Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0929 ATGGTGATTGTGAACCTTGACAAGGAAGGTCAAAAAAGAATGGGAGTTGGAAAATATGAGTTAGGTAGGACTCTAGGTGAGGGCAATTTTGGAAAAGTCAAGTTTGCCAGGAACACCGATTCTGGTCAACCTTTTGCTGTTAAGATTCTTGAGAAGAAGAAGATCATTGATCTCAATACTACTGATCAGATAAAGAGAGAGATAGCATCCTTGAAACTCCTCAAACACCCAAATGTTGTTAGGTTACACGAGGTGTTAGCTAGCAAAACAAAAATCTCCATGGTGCTTGAGTACGTGACTGGAGGGGAGTTATTTTACAAAATTGCATCAAAGGGTAAACTTAACGAACCGGAGGGGAGAAAATTGTTCCAACAGTTGATTGATGGTGTTAGTTACTGCCACAATAAAGGTGTCTTTCACAGAGATCTCAAGCTTGAGAATGTACTTGTGGATAGCAAAGGGAACATAAAGATATCAGATTTTGGCCTTAGTGCTTTACCCCAACATTTTAGGAATGACGGGTTGCTGCATACAACTTGTGGAAGTCCCAATTATGTTGCACCAGAGATTTTGGCTAATAAGGGTTATGATGGTGCAACATCAGATGTATGGTCATGTGGTGTTATCTTGTACGTTATCCTAACAGGACGCTTACCTTTTGATGATAGAAATCTTGCGGTTCTTTATCAAAAGATTTTTAAAGGAGATGTTAAGATACCAAAATGGCTATCATCGGGTGCCCAAAACATGATAAAGGTAATTCTTGATCCCAATCCTAAAACAAGGATAACGATCTCCGAAATCAAAGAAGATCCATGGTTCAAGGAGGACTATAATCCAGCAAACCATGATGATGAGGATGAGGATATAAATATTCACAATGAAGCATTATCCATCAATGAAGTGCCGCATGATGCAGAAGAGAGGAGTCTCACATCACCAACTCTTATCAATGCATTTCAGTTAATAGGGATGTCTTCATGCCTAGACCTCTCTAACTTTTTTGAGAAAGAGGATGTCTCTGAAAGGAACATAAGATTTACATCTAACCTTTCAGCTAAAGATCTGATCGAGAGGATTGAGGATACTGTGACAGAAATGGGATTTAGAATCCGGAATAAAAATGGCAAGTTGAAAGTGATACTAGAGAACAAGACGCATAAAAGTCTAGGTTGCCTCTCAGTGGCAACAGAGGTGTTCGAAATAAGCCCATCATTGTATGTAGTAGAATTAAGGAAGTCCTATGGAGATGCATCAATATATAGACAGTTATGCAAGAGGTTATCAAATGATTTGGGTGTTCCCCCAAATCATATGGAGGTAGTAAGCTCAGGGTCACAAGTGAATTAG 1350 0.3919 MVIVNLDKEGQKRMGVGKYELGRTLGEGNFGKVKFARNTDSGQPFAVKILEKKKIIDLNTTDQIKREIASLKLLKHPNVVRLHEVLASKTKISMVLEYVTGGELFYKIASKGKLNEPEGRKLFQQLIDGVSYCHNKGVFHRDLKLENVLVDSKGNIKISDFGLSALPQHFRNDGLLHTTCGSPNYVAPEILANKGYDGATSDVWSCGVILYVILTGRLPFDDRNLAVLYQKIFKGDVKIPKWLSSGAQNMIKVILDPNPKTRITISEIKEDPWFKEDYNPANHDDEDEDINIHNEALSINEVPHDAEERSLTSPTLINAFQLIGMSSCLDLSNFFEKEDVSERNIRFTSNLSAKDLIERIEDTVTEMGFRIRNKNGKLKVILENKTHKSLGCLSVATEVFEISPSLYVVELRKSYGDASIYRQLCKRLSNDLGVPPNHMEVVSSGSQVN* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0929 449 Gene3D Transferase(Phosphotransferase) domain 1 99 281 - -
Lan12g0929 449 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Lan12g0929 449 Pfam Protein kinase domain 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0929 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Lan12g0929 449 PANTHER SERINE/THREONINE KINASE 12 438 - -
Lan12g0929 449 ProSitePatterns Protein kinases ATP-binding region signature. 25 48 IPR017441 GO:0005524
Lan12g0929 449 Gene3D Phosphorylase Kinase; domain 1 10 98 - -
Lan12g0929 449 CDD CIPK_C 318 429 - -
Lan12g0929 449 SUPERFAMILY Protein kinase-like (PK-like) 17 316 IPR011009 -
Lan12g0929 449 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 12 438 - -
Lan12g0929 449 Pfam NAF domain 314 372 IPR004041 GO:0007165
Lan12g0929 449 ProSiteProfiles Protein kinase domain profile. 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0929 449 Gene3D Kinase associated domain 1, KA1 312 434 - -
Lan12g0929 449 SMART serkin_6 19 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0929 Lan-Chr12 16196361 16202891 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0929 82 443 CBL-interacting serine-threonine protein kinases AT3G17510 67.493 1.46e-172 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan12g0929 Pkinase 3.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0929 K07198 - gmx:100777468 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0929 12 16196361 16202891 Lan12g0929 12 16196361 16202891 ECH
Lan12g0929 12 16196361 16202891 Lan1g1344 1 23135527 23140526 LSH
Lan12g0929 12 16196361 16202891 Lan15g0214 15 2317940 2324474 PCT
Lan12g0929 12 16196361 16202891 Lan14g0078 14 1088998 1095379 PCT
Lan15g0214 15 2317940 2324474 Lan12g0929 12 16196361 16202891 PCT
Lan14g0078 14 1088998 1095379 Lan12g0929 12 16196361 16202891 PCT