Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0923 ATGGAGTTAACTCCAAAGTTAACTCCAAGAGGAAGAACACAAGGTCATGTTTTGACCTTTGATAGAGATGCTGATTCATTTGTGGATGAAGATAAGGAGCTTCAATCAAAGTGGGCTGCAATTGAGAAATTACCAACTTTCAAAAGGATTAAAACTTCTTTTGTTGATGTCAGTCATGATGATGAAGAGGGTGGAAGCACTAGTAAAGAAGGAGATGGAAAAAGGGTTGTTGATGTTACCAAACTTGGAGCTGTGGAAAAGCGTTTGTTTATTGACAAACTCATCAAACACATTGAGAATGATAACCTTCAGTTGCTGCAAAAACTCAGGGAAAGGATGGAAAGAGTCAATGTGAAGTTACCTACTGTGGAGGTTAAGTACAAGAACCTGCATGTGGAAGCAGAATGTGAGGTTGTTCAAGGAAAGCCACTACCTACTCTATGGAACTCTTTTACTAGCTCGTTTTCAGGTCTTGTGAAGACTATATCGTGTAATACACAAGGAGCCAATGCAAGCATTCTAAATGATGTTAGTGGCATCATAAAACCATCAAGGCTTACTCTTCTTCTTGGTCCACCTGGCTGTGGGAAAACAACCTTCTTAATGGCACTGGCTGGAAAACTAGATCAATCTCTCAAGGTTTCTGGAGAAATATCTTACAATGGTTACAAACTAGATGAATTTGTTCCTCAAAAATCATCAGCTTATATAAGCCAGTATGACCTGCATGTTCCTGAGATGACAGTGAGAGAAACAATTGATTTTTCGGCACGCTGTCAGGGGGTTGGAAGTAGAGCCGATGTAATGGCTGAAATCACCAGGAAAGAAAAAGAAGCAGGAATCATCCCGGACCCAGATATTGACACCTACATGAAGGCAATTTCAGTTGAAGGACAAAGCGAAAATCTTCAAACAGAATATGTTTTAAAGATTCTCGGACTGGATATGTGTGCTGACACACTGGTTGGTGATGCATTAGAAATAGGCATTTCAGGTGGACAAAAGAAAAGGTTGACTACAGGAGAGATGATTGTTGGTCCCATTAAAGCTCTTTTCATGGATGAAATATCGACTGGCTTGGACAGCTCCACAACCTTTCAAATAGTTACCTGCCTCCAGCAATTGGCGCATATCACAGATGCAACTGCAGTGCTTTCACTCCTTCAACCGGCTCCAGAAACCTTTGAATTATTTGATGACCTTATATTGATGGCAGAGGGGAAGATAGTATACCATGGTCCCCGCAGTCAAGCACTCCAATTTTTTAATGATTGTGGTTTCTGGTGCCCTGAAAGAAAAGGAGTAGCAGACTTTCTTCAAGAGGTAATATCTAAGAAGGATCAAAGCCAATACTGGTACCGGATGGATATTCCATACAACTATGTTTCAGTGGATCAGTTCTCTGAGATCTTCAAAGAAAGTTATTGGGGAAGAATGTTAGACGATGAGGTCTCACAGCCATCTGATAAATCTCAATCCCATAAAAATGCTTTATCATTTAGCAAGTATTCCTTGGGAAAATGGGATTTATTTAATGCTTGTATGAGGAGGGAGATTCTTCTCATGAAGCGAAATTCATTTATATATATATTCAAAACTGTACAGCTCACAATCACTGCAATCATAACAATGACGGTCTTCATACGCACTCAACTGGCTGTGGACATGATAAGTGCAAACTATTTATTAGGTTCGTTGTATTATACACTTGTTCGCCTCATGACTAATGGAGTTGCTGAGCTGATCATGACTATTACAAGACTTCCGGTCGTCGATAAGCAGAAAACATTCTATCTTTATCCAGCATGGGCTTATTGTCTTCCAGCTTCCATTCTAAAGATTCCATTCTCAGTTCTTGATAGTATTGTGTGGACATCAGTAACATATTATGTTATAGGCTACAGCCCTGAAGCATCAAGGCAAGCAGTTTGTAATTTTTTCAGTTCCATGCACAAAAATAGGCCACTTTTCTGTTTCTTTTATATGCTTTCCTCTGATCTTCTTTTATATTTCTTAACATGGATTAGGTTCTTCCGGCAGTTCCTCTTGCTTGTTGTTTTGCATATGTCATCAACCTCCATGTGTCGTTGTCTTGCCTCCATTTTCAAAACTGATGTTATGGCTTCAACTGTTGGTTCATTGGTGTTAGTACTGATGTTCTTGTTTGGAGGCTTTATTCTTCCTCGACCATCACTACCATCATGGCTGAGGTGGGGATTTTGGCTTTCTCCTATGTCATATGGGGAAATAGGAATAACACTAAATGAATTTCTGGCTCCTCGTTGGCAAAAGATCCAAGAGGGAGGCATCACCATTGGAAGGAAGGTTCTAATTAATCATGGTTTAGACTTCCATGCCAACTTCTACTGGATATCAGTTGGAGCCTTACTTGGTTTCACAGTACTTTTTGATTTTGGATTTATCTTGGCATTAACTTACTTAAAACAGCCGAAAATGTCTCGAGCTTTAGTTTCGAAAAAGAGGCTCTCTCAGCTGAGGGGAGGAGAAAAAAGCAACAATGTGGAACTAAAATCAGTTACAGTTGATATTAAGCGCACACCAAGGGGAACTCAAAGTACAGGGAAAATGGTCCTGCCCTTTGAGCCACTGACAATAGCATTCAAGGATGTCCAGTACTTTGTTGACACCCCTCCGGAGATGAGAAAACACGGTTCAAATGAGAAGAAACTACAATTGCTTCGAGATATCACAGGAGCCTTTAGGCCAGGAATTCTTACTGCACTGATGGGAGTGAGTGGAGCAGGGAAGACAACTCTCATGGATGTCCTTTCAGGAAGAAAAACTGGAGGTATCATCGAGGGGGATATAAGAATTGCAGGATACCCGAAAGTGCAGAAGACATTTGAAAGAGTTTCAGGTTACTGTGAGCAGAATGACATACATTCTCCGTATATAACAGTTGAAGAATCTGTCACATACTCAGCTTGGCTGCGGTTGCCAAGGGAGATTGATTCGGTCACAAAAGGGAAATTTGTGGAGGAAGTCCTTGAAACAATTGAGCTTGATGATATAAAGGACTGTTTAGTTGGGATCCCTGGCCAAAGTGGTTTATCTACCGAACAACGTAAAAGACTAACCATTGCAGTGGAGCTTGTTTCCAATCCATCAATAATCTTTATGGATGAACCAACATCAGGCTTGGATGCACGAGCAGCTGCAGTTGTTATGCGTGCAGTGAAGAATGTTGTTGGCACTGGCAGGACCACGGTTTGCACTATACATCAACCAAGCATTGACATATTTGAGACTTTTGATGAGTTGATTCTAATGAAATCGGGAGGACAGATAATATACAGTGGAACGCTAGGCTATCAATCAAGCAAACTGATCGAATATTTTCAGAGTATACCTGGAGTTCCAAAGATCAAAGACAATTATAATCCTGCAACTTGGATGTTGGAAGCTACCTCTGCATCTATAGAAGAAGAACTTCAAGTAGATTTTGCAAAAATCTATCAAGAGTCACATCTTTACCAGGAAACCCTTGAATTGGTGAGAGAATTAAGTCAACCATGGCCAGGTTCAAGCGACTTACACTTTTCAACCCGATTCTCACAGAATATCTTGGGGCAGTTTATGGCATGCCTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAATACAACTTAACACGTTTCATATTCATGGTTGCTGCAGCAGTAATATTTGGTGCGGTATTTTGGCAGAAAGGGAATAAAATAAACAACCAGCAGGATTTGTTCAATGTACTTGGATCGTTGTATATTGCTGTAATATTCCTGGGTGTAAATTACTGCTCAACAATTCTACCATACGTGTCAACCGAACGCAGTGTCTTGTACCGGGAAAAATTTGCTGGAATGTATTCTTCCATGGCCTATTCATTTGCACAGGTGGCTATCGAAATACCATATATCTTATTGCAATCAATTCTGTATGTGGCTATCACATATCCAATGATAGGTTTCCATTGGTCAGTTGAGAAAGTGTTTTGGTACTTCTACTCCACATTCTGTACATTTTTGTACTTCGTATATCTTGGAATGTTGATAATGTCATTGAGCATAAATCTGGATATAGCTGCTGTATTGTCAACTGCAGTCTACACCATATTCAATCTCTTTTCTGGATTCCTCATGCCAGGACCGAAAATTCCTAAATGGTGGGTTTGGTGCTACTGGATCACCCCCACAGCTTGGTCACTGAATGGGCTCCTAACTTCACAATATGGAGACATGGATAAGGAAATACTCATATTTGGGGAGAAAAAACAAGTTGGTTCTTTCCTAAAAGATTACTATGGCTTCAGACATGACAGATTAAGCATTGTGGCTGTGGTGCTCATTGCTTACCCAATTATTTATGCATCTCTCTTTGCCTATTGCATAGGGAAAATGAATTTCCAAAAGAGATAG 4419 0.4026 MELTPKLTPRGRTQGHVLTFDRDADSFVDEDKELQSKWAAIEKLPTFKRIKTSFVDVSHDDEEGGSTSKEGDGKRVVDVTKLGAVEKRLFIDKLIKHIENDNLQLLQKLRERMERVNVKLPTVEVKYKNLHVEAECEVVQGKPLPTLWNSFTSSFSGLVKTISCNTQGANASILNDVSGIIKPSRLTLLLGPPGCGKTTFLMALAGKLDQSLKVSGEISYNGYKLDEFVPQKSSAYISQYDLHVPEMTVRETIDFSARCQGVGSRADVMAEITRKEKEAGIIPDPDIDTYMKAISVEGQSENLQTEYVLKILGLDMCADTLVGDALEIGISGGQKKRLTTGEMIVGPIKALFMDEISTGLDSSTTFQIVTCLQQLAHITDATAVLSLLQPAPETFELFDDLILMAEGKIVYHGPRSQALQFFNDCGFWCPERKGVADFLQEVISKKDQSQYWYRMDIPYNYVSVDQFSEIFKESYWGRMLDDEVSQPSDKSQSHKNALSFSKYSLGKWDLFNACMRREILLMKRNSFIYIFKTVQLTITAIITMTVFIRTQLAVDMISANYLLGSLYYTLVRLMTNGVAELIMTITRLPVVDKQKTFYLYPAWAYCLPASILKIPFSVLDSIVWTSVTYYVIGYSPEASRQAVCNFFSSMHKNRPLFCFFYMLSSDLLLYFLTWIRFFRQFLLLVVLHMSSTSMCRCLASIFKTDVMASTVGSLVLVLMFLFGGFILPRPSLPSWLRWGFWLSPMSYGEIGITLNEFLAPRWQKIQEGGITIGRKVLINHGLDFHANFYWISVGALLGFTVLFDFGFILALTYLKQPKMSRALVSKKRLSQLRGGEKSNNVELKSVTVDIKRTPRGTQSTGKMVLPFEPLTIAFKDVQYFVDTPPEMRKHGSNEKKLQLLRDITGAFRPGILTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIAGYPKVQKTFERVSGYCEQNDIHSPYITVEESVTYSAWLRLPREIDSVTKGKFVEEVLETIELDDIKDCLVGIPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVGTGRTTVCTIHQPSIDIFETFDELILMKSGGQIIYSGTLGYQSSKLIEYFQSIPGVPKIKDNYNPATWMLEATSASIEEELQVDFAKIYQESHLYQETLELVRELSQPWPGSSDLHFSTRFSQNILGQFMACLWKQHLSYWRSPEYNLTRFIFMVAAAVIFGAVFWQKGNKINNQQDLFNVLGSLYIAVIFLGVNYCSTILPYVSTERSVLYREKFAGMYSSMAYSFAQVAIEIPYILLQSILYVAITYPMIGFHWSVEKVFWYFYSTFCTFLYFVYLGMLIMSLSINLDIAAVLSTAVYTIFNLFSGFLMPGPKIPKWWVWCYWITPTAWSLNGLLTSQYGDMDKEILIFGEKKQVGSFLKDYYGFRHDRLSIVAVVLIAYPIIYASLFAYCIGKMNFQKR* 1473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0923 1472 SMART AAA_5 909 1101 IPR003593 -
Lan12g0923 1472 SMART AAA_5 183 415 IPR003593 -
Lan12g0923 1472 PANTHER ATP-BINDING CASSETTE TRANSPORTER 6 648 - -
Lan12g0923 1472 PANTHER ATP-BINDING CASSETTE TRANSPORTER 675 1472 - -
Lan12g0923 1472 Pfam ABC-2 type transporter 389 466 IPR043926 GO:0140359
Lan12g0923 1472 Pfam ABC-2 type transporter 1081 1142 IPR043926 GO:0140359
Lan12g0923 1472 Gene3D - 886 1118 IPR027417 -
Lan12g0923 1472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 896 1109 IPR027417 -
Lan12g0923 1472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 431 IPR027417 -
Lan12g0923 1472 Coils Coil 106 126 - -
Lan12g0923 1472 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 6 648 - -
Lan12g0923 1472 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 675 1472 - -
Lan12g0923 1472 Pfam ABC-2 type transporter 1198 1410 IPR013525 GO:0016020|GO:0140359
Lan12g0923 1472 Pfam ABC-2 type transporter 510 757 IPR013525 GO:0016020|GO:0140359
Lan12g0923 1472 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 159 431 IPR003439 GO:0005524
Lan12g0923 1472 CDD ABCG_PDR_domain2 869 1107 IPR034003 -
Lan12g0923 1472 Pfam Plant PDR ABC transporter associated 762 824 IPR013581 -
Lan12g0923 1472 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 872 1125 IPR003439 GO:0005524
Lan12g0923 1472 Gene3D - 156 424 IPR027417 -
Lan12g0923 1472 Pfam ABC transporter 174 356 IPR003439 GO:0005524
Lan12g0923 1472 Pfam ABC transporter 900 1052 IPR003439 GO:0005524
Lan12g0923 1472 Pfam ABC-transporter N-terminal 99 149 IPR029481 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0923 Lan-Chr12 16142456 16151695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0923 897 1084 Calmodulin-binding Proteins AT2G36910 28.079 8.36e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0923 K08711 - qsu:111997722 2193.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0923 12 16142456 16151695 Lan1g1350 1 23183659 23193478 LSH