Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0915 ATGGTAGCTGAAGCGGAAATCGTTTACCAGCAGAGTATTCCGAACATGTTAGACGTAAAGTATCGACTTTGCGTAGCGCAAGAACACAACGTCAAGGTTGAGGTTTCACCCACCTCCCCTTCTATCCAAATATTTAGCCAAGTTCGGGTTTCCTCTGAATCCTTTTCTACTGAAACTTCTTCGTATGAATCGGCTGTGACTCGCTCTGAGATCATCGAAGATTCCATTATGGAGACTCCTGCAGCCAAGTTTATCCCAAATGTGCGTTCCGGTAGCTATACTGAAATTGGGCCAAGGGTATCTATGGAAGATGAACACATTCAGATTGATGATCTAGCTTCCCATCTTGGATTTGTGTTCCAGTGCCCGATACCAAGCGCGTTTTATGCAGTTTTTGATGGGCATGGAGGGCCTGATGCAGCTGCTTTTGTTAAGAGGAATGCAATGAGCTTATTTTTTGAAGATGCTAATATGCTGCAGTCATATGATACTGATGCCTTTTTTATGAAGAAGCTGGAGGAGTCTCATCGAAGAGCATTTTTGCGGGCAGACCTCGCCTTGGCTGATGAGAGAAGTGTTAATAGTTCATGCGGGACTACAGCGTTGACTGCCCTTGTACTTGGAAGGCATTTGATGGTTGCTAATGCTGGTGACTGTCGAGCAGTACTTTGCCGAAGAGGTAAAGCTGTTGAGATGTCTCAAGATCACAGGCCAAGTTATTTACCAGAACAGAGGAGAGTGGAGGAGCTAGGTGGCTTTGTCGATGACGGATATCTCAATGGTTATCTTTCAGTAACTCGCGCACTTGGGGATTGGGACTTTAAATTTCCACTTGGTGCTGCATCTCCTCTTATTGCTGATCCAGATGTTCAATTGGTTACATTAACAGAGGAGGATGAGTTTTTGATCATTGGGTGTGATGGGATATGGGATGTAATGTCCAGCCAATACGCAGTTAGTCTTGCTCGCCGTCGACTAAGAAGGCATGACGACCCACAGCAATGTGCAAGAGAACTTGTCAAGGAAGCACTGCGCCTAAACACATCAGATAATCTCACAGTGATTGTTATATGCCTGTCCTCAGTTGAAAGCATTGTCGAATCTTGTCCGCCACGACGACGAAGATTTAAAGCTTGCGGTCTGTCCGAAGAAGCCTGTAACTGA 1164 0.4536 MVAEAEIVYQQSIPNMLDVKYRLCVAQEHNVKVEVSPTSPSIQIFSQVRVSSESFSTETSSYESAVTRSEIIEDSIMETPAAKFIPNVRSGSYTEIGPRVSMEDEHIQIDDLASHLGFVFQCPIPSAFYAVFDGHGGPDAAAFVKRNAMSLFFEDANMLQSYDTDAFFMKKLEESHRRAFLRADLALADERSVNSSCGTTALTALVLGRHLMVANAGDCRAVLCRRGKAVEMSQDHRPSYLPEQRRVEELGGFVDDGYLNGYLSVTRALGDWDFKFPLGAASPLIADPDVQLVTLTEEDEFLIIGCDGIWDVMSSQYAVSLARRRLRRHDDPQQCARELVKEALRLNTSDNLTVIVICLSSVESIVESCPPRRRRFKACGLSEEACN* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0915 387 SUPERFAMILY PP2C-like 83 360 IPR036457 -
Lan12g0915 387 ProSiteProfiles PPM-type phosphatase domain profile. 89 359 IPR001932 -
Lan12g0915 387 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 1 380 - -
Lan12g0915 387 SMART PP2C_SIG_2 104 359 IPR001932 -
Lan12g0915 387 PANTHER PROTEIN PHOSPHATASE 2C 1 380 IPR015655 GO:0004722|GO:0006470
Lan12g0915 387 SMART PP2C_4 79 357 IPR001932 -
Lan12g0915 387 Gene3D - 75 364 IPR036457 -
Lan12g0915 387 CDD PP2Cc 89 359 IPR001932 -
Lan12g0915 387 ProSitePatterns PPM-type phosphatase domain signature. 128 136 IPR000222 GO:0043169
Lan12g0915 387 Pfam Protein phosphatase 2C 99 351 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0915 Lan-Chr12 16097861 16100376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0915 1 385 PP2C-type Phosphatase Gene Family AT1G48040 54.639 1.32e-136 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0915 K14803 - gmx:100775577 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0915 12 16097861 16100376 Lan12g0915 12 16097861 16100376 ECH