Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0912 ATGACAGTTGTGGAATCAATGGTTGTAAAAGGAAGAGACAGTAGCAGCAGCAACAACAACAACAACATAGAAAGCAAGGAAGACATGGACCTAAGAAGAGGTCCTTGGACCGTTGATGAGGACCTCGCCCTCACCAATTACATTGCCAATCATGGCGAGGGTCGATGGAATTCCCTAGCCCCTTTAGCAGGCCTCAAACGAACGGGAAAGAGTTGCAGATTGAGGTGGCTGAACTATCTCCATCCTGATGTTCGTCTTGGAAACATCACACTTGAAGAACAACTTTTGATTCTTGAGCTCCATAATCGCTGGGGTAACAGATGGTCTAAAATTGCTCAATGTTTACCGGGAAGGACGGACAATGAGATAAAAAACTATTGGAGAACTCGTGTTCAAAAACATGCCAAACAACTTAAATGCGACATGAATAGCAAGCAATTCAAGGACACCATACGCTACCTTTGGATGCCAAGGCTAGTAGAGCGCATTCAAGCCTCAGCACCAACCACCTTCAAAATGAGTTCTCCAACTTTGTGTACATGTACAAATGTCACCACTAGTAACATATACGACAACAACCTCAACAATTCCGAGGTTCACAAAGGGAAAATGGTGTTACCTCAAAATGGTGTTATGAACGATGATTTTGTTGGTTCACACATTACTACTTCTACTTCACAAAGTTATACCCCAGAGAATAGTAGTACTGGAGCATCATCAGACACGTTTGGGACTCATGAAGTTTCACCAATCTTGGATTTGAGTATTGATTATTACAGTGTTCCAGTTAGTTCTAACAATAACCCTAACCCTCAAGATTACTTTCAACCCTCTCAATTTAACTACTCTGATTGCATCACAAGCCCATCTTGGTTCAATTTTCAAGCCATGGAGCCAAACTCACCGTGGATTCAAAGTGGGGACACATTGAACAATTTTTGGAATGTTGACAGTAACATGTTTCTACAGCAACAACTCATGAGTGACAACATGTAA 996 0.4177 MTVVESMVVKGRDSSSSNNNNNIESKEDMDLRRGPWTVDEDLALTNYIANHGEGRWNSLAPLAGLKRTGKSCRLRWLNYLHPDVRLGNITLEEQLLILELHNRWGNRWSKIAQCLPGRTDNEIKNYWRTRVQKHAKQLKCDMNSKQFKDTIRYLWMPRLVERIQASAPTTFKMSSPTLCTCTNVTTSNIYDNNLNNSEVHKGKMVLPQNGVMNDDFVGSHITTSTSQSYTPENSSTGASSDTFGTHEVSPILDLSIDYYSVPVSSNNNPNPQDYFQPSQFNYSDCITSPSWFNFQAMEPNSPWIQSGDTLNNFWNVDSNMFLQQQLMSDNM* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0912 331 PANTHER MYB TRANSCRIPTION FACTOR 17 326 - -
Lan12g0912 331 Gene3D - 90 153 - -
Lan12g0912 331 SMART sant 85 133 IPR001005 -
Lan12g0912 331 SMART sant 32 82 IPR001005 -
Lan12g0912 331 Pfam Myb-like DNA-binding domain 33 80 IPR001005 -
Lan12g0912 331 Pfam Myb-like DNA-binding domain 89 129 IPR001005 -
Lan12g0912 331 MobiDBLite consensus disorder prediction 9 24 - -
Lan12g0912 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 84 IPR017930 -
Lan12g0912 331 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 17 326 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lan12g0912 331 MobiDBLite consensus disorder prediction 1 28 - -
Lan12g0912 331 CDD SANT 35 80 IPR001005 -
Lan12g0912 331 ProSiteProfiles Myb-like domain profile. 28 80 IPR001005 -
Lan12g0912 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 87 135 IPR017930 -
Lan12g0912 331 ProSiteProfiles Myb-like domain profile. 81 131 IPR001005 -
Lan12g0912 331 Gene3D - 33 85 - -
Lan12g0912 331 SUPERFAMILY Homeodomain-like 30 127 IPR009057 -
Lan12g0912 331 MobiDBLite consensus disorder prediction 222 244 - -
Lan12g0912 331 CDD SANT 101 129 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0912 Lan-Chr12 16077394 16079379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0912 7 274 MYB Transcription Factor Family AT3G06490 57.971 2.40e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan12g0912 Myb_DNA-binding 8.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0912 K09422 - gmx:100791349 410.994