Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0910 ATGTTTGTGCCAAAGATGTGGAATTTAGGTGCAGATGTGAATGTTATTATGTGTTTCCTCTGCCTATGTTTCTTTCTTTCAATTAAAGCATCAGAAGAAATAAATGTGGGAACCTATGAATCTGATAGAATAATAGATCTTCCTGGCCAACCTTCAACCCCAACAGTCTCACACTTTTCAGGTTATATCACTGTCAATGAAGACCATGGGAGGGCCCTTTTCTATTGGTTCTATGAAGCTCAATCTGAACCGTCCAACAAGCCTCTCCTTCTCTGGCTCAATGGAGGACCTGGATGCTCCTCTGTTGGGTATGGTGCAATTGTTGAAATAGGGCCTCTTCTAATCAATAAAGATGGTGATGGATTACATTTCAATACATTCTCATGGAACCAAGAAGCAAATCTGTTATTTGTGGAGTCCCCAGTTGGAGTTGGATTTTCTTACACAAACACTTCTTCTGATCTCACCAGATTGGAGGATGGTTTTGTGGCTGAGGATTCCTACAACTTCTTAGTGAACTGGCTAGAAAAATTCCCACAGTTCAAATCCAGGGACTTTTTTATAGCAGGAGAAAGCTATGCAGGCCACTATATCCCTCAGCTTGCAGAACTAGTCTTTGATCGAAACAAAGATACAAACAAATACCCCTTTATTAATCTTAAAGGTTTCATTGTAGGGAATCCAGAAACTGAAGATTATTATGACTATAAAGGCCTTCTAGAATATGCATGGAGTCATGCAGTTATATCAGACCAACAATATGACAAAGCAAAACAAGTATGTGATTTTAAGAAATCTGAATGGTCTAAAGAATGCAACCAAGCCATGAATGGAATCTTCCAAGATTACTCAGAAATTGACATTTACAACATTTATGTCCCCAAATGTCGTCTAAATAGCACATCCTCAGTGACAATAGTTCATGATAGTAAGAGTCATGGCCCTGAGTCATTTACAGAGGTGAGAAATGATTATAGAGTGGGAAGAATGAGAATTTTTGGGGGTTATGATCCATGTTATTCCCCATATGCAGAAGAATATTTTAATAGGATAGATACTCAGTCATCTTTACATGCAAACATTGAAAGAAGAAATACTAACGTAACATGGAAGGTTTGCAATGATTCCATATTGAGGACTTACAACTTCTCTGTTTTTTCCGTCTTACCCATCTACACCAAACTCATCAAGGGTGGGCTTAAGATATGGATTTACAGTGGTGATGCAGATGGCAGAGTACCTGTGATTGGGACAAGATACTGCATTGAAGCTCTAGGATTACCTCTTAAGTCTAGTTGGCGATCTTGGTACCACGATAATCAGGTTGGAGGAAGGATAGTGGAATATGAAGGACTGACTTATGTGACAGTGAGAGGAGCTGGTCACTTGGTGCCACTGAACAAGCCAAGTGAGGCTCTCACCATTATTCATTCTTTCCTAACAGGGGACCATCTTCCTACTCAACTATAA 1470 0.3946 MFVPKMWNLGADVNVIMCFLCLCFFLSIKASEEINVGTYESDRIIDLPGQPSTPTVSHFSGYITVNEDHGRALFYWFYEAQSEPSNKPLLLWLNGGPGCSSVGYGAIVEIGPLLINKDGDGLHFNTFSWNQEANLLFVESPVGVGFSYTNTSSDLTRLEDGFVAEDSYNFLVNWLEKFPQFKSRDFFIAGESYAGHYIPQLAELVFDRNKDTNKYPFINLKGFIVGNPETEDYYDYKGLLEYAWSHAVISDQQYDKAKQVCDFKKSEWSKECNQAMNGIFQDYSEIDIYNIYVPKCRLNSTSSVTIVHDSKSHGPESFTEVRNDYRVGRMRIFGGYDPCYSPYAEEYFNRIDTQSSLHANIERRNTNVTWKVCNDSILRTYNFSVFSVLPIYTKLIKGGLKIWIYSGDADGRVPVIGTRYCIEALGLPLKSSWRSWYHDNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPSEALTIIHSFLTGDHLPTQL* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0910 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 137 IPR001563 GO:0004185|GO:0006508
Lan12g0910 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 138 148 IPR001563 GO:0004185|GO:0006508
Lan12g0910 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 174 199 IPR001563 GO:0004185|GO:0006508
Lan12g0910 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 452 465 IPR001563 GO:0004185|GO:0006508
Lan12g0910 489 Gene3D - 339 377 - -
Lan12g0910 489 Pfam Serine carboxypeptidase 48 481 IPR001563 GO:0004185|GO:0006508
Lan12g0910 489 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 15 487 - -
Lan12g0910 489 Gene3D - 388 482 - -
Lan12g0910 489 Gene3D alpha/beta hydrolase 38 298 IPR029058 -
Lan12g0910 489 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 15 487 IPR001563 GO:0004185|GO:0006508
Lan12g0910 489 SUPERFAMILY alpha/beta-Hydrolases 44 483 IPR029058 -
Lan12g0910 489 ProSitePatterns Serine carboxypeptidases, histidine active site. 452 469 IPR033124 GO:0004185
Lan12g0910 489 ProSitePatterns Serine carboxypeptidases, serine active site. 188 195 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0910 Lan-Chr12 16061167 16064394 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0910 363 485 Calmodulin-binding Proteins AT2G22960 31.452 1.77e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0910 K16297 - gmx:100815141 843.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0910 12 16061167 16064394 Lan12g0910 12 16061167 16064394 ECH