Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0890 ATGGGTGCGCAAGAGAAATCACAGGCTAACACTAATTCGATGCAGCGTGTCAAAGTTTACTGTCTGAATGATGATGGGAAATGGGATGACCAGGGCACTGGACATGCTGCTGTTGATTATTTGGAGCACCCAGAAGAGTTGGGTTTATTTGTTTATGATGAAGAGGAGAATGAGACCATGCTTTTGCATCACATCAGTTCTGATGATATTTACAGGAAGCAAGAAGATACAATTATCTCATGGAGAGATCCAGAATATGCTACAGAACTGGCACTTAGCTTTCAAGAGACTACTGGCTGCTCTTACATATGGGACCACATTTGCAATGTGCAGAGGAATATGCATTTTAATACGTTAAATAGTGAGCCATTTCACAGTGTTAACAGCGAGTTGAGGGGGTTGCCTGCTATTGAATTATCCACACTCCCTTTGATTATTAAGACTGTGGTTGACAGTGGCATTGCAGATCATTTGCGGCTTACAGAACTAATTTTAAATGATCAAGAATTTTTTCCAAAGCTGGTAGAAGTATTCAGAGTTTGTGAAGACTTGCAAAATATGGATGGCCTTCACATGATTTTTGAAATAGTCAAAGGGATCATTTTGCTTAATAGTACACCAATTTTTGAGAGAATCTTCAGCGATGATTTTATAGTGGACATCATTGGTGCCCTCGAGTATGATTCAGAGGCTCCTTGTGTTCAAAATCATCGAAAGTTCTTAAAGGAACATGTTGTCTTTAAGGAGGCCATACCTATAAAAGATCCTCTTGTGTTGTCAAAGATACATCAAACATATAGAGTTGGCTTTTTGAAGGATGTTGTTTTGGCTAGACTCTTGGATGAGGCTACTGGTGCTAATCTTAACAAAATGATACATGCAAACAATGCTGTTGTAGTTTCTTTGTTGAAGGATGACAGTGCATTTATCCAGGAGTTGTTTGCTAGGTTAAGATTGCCCACTACCTCTCTAGAATCCAAGAAAAACTTGGTCTCTTTCTTGCATGAGTTTTGTAGTTTAAGCAAGAGCTTATCGACGGTCCAGCAGCTTCGTCTTTTTAGAGATCTAATGAATGAAGGCATCTTCGATGTTGTCAGCGATGTTTTGCAATATCAAGACAAGAAGCTTGTGCTAACTGGAGCAGATATTCTCATGCTCTTCTCAAGTCAAGATCCTAACCTTTTACGATCCTATGTTGTCCGCCAAGAAGGAATTGTACTTCTAGGACTTTTGGTTAAGGGAATGATAACAGATTTTGAAGAGAACATGCACTGCCAGTTTCTCGAGATTCTCCGAAGCTTATTGGATTCATGTACTTTGTCTGGACCACAGAAGGACACTATTATTGACATATTTGTTGAACAGAGGGACGCTATTATTGACATATTCTTTGAGAAGCATTTGGGTCAACTGATCAATGTTATAACCAATTCATGTCCTTCAGAAAATATTACTGATGCAAATTGCAAATCAGTATGTGTTGGAAGAAGTGTTCAGCGTCCGGGTGGGACAAAGTCCGAGATACTGTCAAACATTTGTGAATTACTTTGCTTTTGTGTTCTACATCACCCATATAGGATAAAGTGTAACTTTCTTCTTAATAATGTGATTGAAAAAGTTTTGCTACTGACACACAGAAGAGAACGATACTTAGTTGTTACTGCTGTCCGGTTTGTTCGTACTATTCTCGCCCACCACGATGAACATGTGATAAATTATTTTGTTCAGAACAATGTTCTAAAACCAATTGTAGATGTCTTCGTTGCTGATGGCAGCCACTACAATCTACTCAACTCTGCAGTTCTAGAGCTTTTTGAGTTTCTTCGGAAGGAGAGTCTGAAACCATTGCTGATATATATAGTTGATTCTTTCTGGGACCAGCTGGTGAAATTTGAGTATTTGATTTCCATTCAGTCACTGAAAATAAAATATGAGCAGTGTTTGGATAATGGTGGGATAAAAGGTGCTGCTGCTATAGTGGACCCTCGAAGACGAATTGATGAGCGGGCTCTGGAGAAAGAAGAGGAGCACTATTTTAATGAAGACAGTGACGAGGAAGGTATAGCCTCTGCTTCTTCTCGGCCTAATGAGAAAAGACCGCAACAACCTATATCCAATGGAGTTGCTGCAAGCTATTCGAATTCAAGTCCTTGGTCTTGTGAACTTGTTGATTATGATGATGATGAAGATTACAGGCCATCACCAAAGAAGCTGCCTGAATCGTCTGAGAAAGGGACAATGGAGTCTCTGAGGCAGAAAAGGAAATTACCTTCAAAGGATAAGATGCCTAAACTTGTGAAGAAGCATAAGTTATCCAAGAACTCAAAATCTAAAGATAGTGTTTTTTCTGCTTTGTGTTCAACATTGAGCCAAGCTTTGGTACCTGGCAAGAAAATCACTACAAACAGTCATACAGCTGTTCAAACAGTTGAAGGGAAAATGAGCTCAAGTGAAGACAATCAGGATGAAAGGCCAAATATTTCTAGAAGCTGCTCTGATAATAATAGCAACAAAGTAGCTGAAGGTAACCATGTAGAGAAAGAAACTGCAGCCTCTAGAAGCTGTTCTGATTGCCTGTGTGGCACATCAGATAACATACCGATGAGTGGAGAAGATCGTCAATTGGTTCCTTCAAATTCCTCGCCAGAGATGGCAGTAAATGGATCATAA 2670 0.3951 MGAQEKSQANTNSMQRVKVYCLNDDGKWDDQGTGHAAVDYLEHPEELGLFVYDEEENETMLLHHISSDDIYRKQEDTIISWRDPEYATELALSFQETTGCSYIWDHICNVQRNMHFNTLNSEPFHSVNSELRGLPAIELSTLPLIIKTVVDSGIADHLRLTELILNDQEFFPKLVEVFRVCEDLQNMDGLHMIFEIVKGIILLNSTPIFERIFSDDFIVDIIGALEYDSEAPCVQNHRKFLKEHVVFKEAIPIKDPLVLSKIHQTYRVGFLKDVVLARLLDEATGANLNKMIHANNAVVVSLLKDDSAFIQELFARLRLPTTSLESKKNLVSFLHEFCSLSKSLSTVQQLRLFRDLMNEGIFDVVSDVLQYQDKKLVLTGADILMLFSSQDPNLLRSYVVRQEGIVLLGLLVKGMITDFEENMHCQFLEILRSLLDSCTLSGPQKDTIIDIFVEQRDAIIDIFFEKHLGQLINVITNSCPSENITDANCKSVCVGRSVQRPGGTKSEILSNICELLCFCVLHHPYRIKCNFLLNNVIEKVLLLTHRRERYLVVTAVRFVRTILAHHDEHVINYFVQNNVLKPIVDVFVADGSHYNLLNSAVLELFEFLRKESLKPLLIYIVDSFWDQLVKFEYLISIQSLKIKYEQCLDNGGIKGAAAIVDPRRRIDERALEKEEEHYFNEDSDEEGIASASSRPNEKRPQQPISNGVAASYSNSSPWSCELVDYDDDEDYRPSPKKLPESSEKGTMESLRQKRKLPSKDKMPKLVKKHKLSKNSKSKDSVFSALCSTLSQALVPGKKITTNSHTAVQTVEGKMSSSEDNQDERPNISRSCSDNNSNKVAEGNHVEKETAASRSCSDCLCGTSDNIPMSGEDRQLVPSNSSPEMAVNGS* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0890 889 SUPERFAMILY ARM repeat 308 609 IPR016024 -
Lan12g0890 889 MobiDBLite consensus disorder prediction 807 889 - -
Lan12g0890 889 MobiDBLite consensus disorder prediction 729 756 - -
Lan12g0890 889 MobiDBLite consensus disorder prediction 674 692 - -
Lan12g0890 889 PANTHER ATP SYNTHASE GAMMA-RELATED 1 821 - -
Lan12g0890 889 Gene3D - 280 625 IPR011989 -
Lan12g0890 889 SUPERFAMILY PH domain-like 15 111 - -
Lan12g0890 889 MobiDBLite consensus disorder prediction 757 774 - -
Lan12g0890 889 MobiDBLite consensus disorder prediction 674 779 - -
Lan12g0890 889 PANTHER BINDING PROTEIN-RELATED 1 821 - -
Lan12g0890 889 MobiDBLite consensus disorder prediction 855 889 - -
Lan12g0890 889 Pfam Phosphatase 4 regulatory subunit 3 168 356 IPR006887 -
Lan12g0890 889 Gene3D - 10 128 IPR011993 -
Lan12g0890 889 MobiDBLite consensus disorder prediction 694 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0890 Lan-Chr12 15924735 15935505 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0890 K17491 - gmx:100786790 1318.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0890 12 15924735 15935505 Lan4g0632 4 8685703 8689318 PCT
Lan12g0890 12 15924735 15935505 Lan16g0202 16 1583408 1600020 PCT
Lan4g0632 4 8685703 8689318 Lan12g0890 12 15924735 15935505 PCT
Lan16g0202 16 1583408 1600020 Lan12g0890 12 15924735 15935505 PCT