Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0884 ATGGGAGCTGAAAAGGTTGGGACAAAAAGTGAAGGTGGTGTTTTCCGGTTGTTTGACTGGACCTCAAAATCTAGGAAGAAATTATTTGCATCCAAGTCAGATTTTCCTGAGTCTTCGAAACAGAGAAGGAAAATTGATGACAGCTTGACAATGAAGCATTCCTATCTGATGAGGGAGGATGAAGATGAAATTGGAGTAAGAGCGAGTATTAGAGGAAGTAATGATCATAGTTATGCTTCATCAGTCACAGATGATGAAATATGTGGAACAAGGACCCCTAGTGTAGTTGCCAGACTCATGGGATTAGAGTCTGTGCCATTTTCCGGTGTTCCTGATCCACATTCTACCCCATATTTTGATAGCCGATCTCTTCGAGAGGCGCAGTATTGTAGGACAAATCTCAATTGTCAGCATGATCATGAGATCCCATATTCTGGAAGGTTGCTAGAAAAGGATGAGGGCTCTTCTAGGAACAGCATGGGGCCAAAACTTCATAAGAACTTTAGCAGGCCAATTGAAAAGTTTCAAGCAGAAGTAATGCCTCCTAAATCGGCTAAATCAATTCCTGTCACACACCATAAACTTTTGTCCCCTATTAAGAGTCCTGGTTTTGTTCCAACAAATAATGCTGCTTATGTAATGGAGGCTGCTGCAAGAATTATTAAGTATGGCCCTCAAGTTACTACAAAGGTTAAATCACCTTCGGTAGCTTCATCGACAGTATCATTGAGGGTTAGAGATCTTAAAGAAAAAGTGAAGGGTTCTCCGAATGGACCTTCGGTTGAGACATCTTCATTGGCTTCTAGAGTTGGAGATCATAGTGAAAAACAAGAAATTTCTCATAGAACTTGCAGGCTTACTGAAACATCTCAAAGGTCAGTTGAGTCTAATCCTGCCAAGTATTCCAAAGGACAATCTTTGAACAAAAGCAGGGAGAGATCTATCAGTTCTCTTACTGAAGCAGAAGAAGATTCTTCTTTGAAGGACAAAGGGAAGTCTATTTCACTAGCAATCCAAGCAAAAATGAATGTTCAAAGAAGGGAAGGGTTGTGTTTGAGTGGTGGTGAAAGTTTAGCGGACCGAAAAGAAAATTTTGACATTACAACCAAACTACCTCAGAAGGAGAATATTCAAAGAAGTATGCATAAGAAATCATGTGGTCAAAATGCTTCAGGTGTTCTCAAGCAGAATAATCAGAAACAGAATTGTACAATTGATAAAGACAAACTACCATCAAAGCCACTGGTTGCTGGTTCAAACAATAGAAAGGTTCAGTCTGTGGATTCCTCTTATGGAAGTGGCAAAAGTTCTGGTGGTAAATCCATTGCAAAATCTAAAGGTGGACCAAAAAACTCAGCTATTCAGGTAAAAGATGGTGAAAAGGAAACTCTATATACCCGAACAAACAATTTCTCTATAGAGAAGAGGTCTGCAGATAGAAACTGGAATGATAGTGTTGATAGTTTGTTCATTGACAAAACTGTGAAGCATGCTCACTCTAATCTACTCAGTGATAAACACTATAGTTGCACTGGAGAAGTAAAAAAGAGAGACATTGATGTAGTTTCCTTCACATTTACCACGCCGTTGACACGAAAGACCTCAGGGTTTGAGAAATCTGGACAAACTGGCCTGAAGAGCAATGGTTCCTTGAATCAACACAATAAAAGAGTGTTGCTTGAAACAGGCAGTACAAGGTCTCCAGTAGGATACAATGAAGCTGGTGGTGGTGATGCCTTAGGTATTCTTTTGGAACAGAAGTTGAAGGAGTTAACATATGGATGTGAGACCTCTTCTGGCGACTCTTCCAAAGCGAGGCCACCTTCCAGTACTGCATCAAAATCAAATGGCCTGGTTCCTACAATGAATTCAGTTAACCTCATTCGACAGTTGCAACAGAAGAAAGACCAAAACATGTTATTTGCAGATGCAGTATGCAGTAGCCGTGAATCGGACATTTCCTTCACTGGTCTTCTGGAATTACAATCCAAACATAGGCTGTGGGTTGATGAGATGAAGGAGTGTAAAAGCAATCCTGAGGAGGCAAAGTCATTCAATTGCCGACAGCCAAGTCCGATCTCTGTTCTTGAGCCCTCTTTTTCAACTGAAAGCTGTGATTCTTTATTCAGAACAGATGCTGCTACTAGTTCAGAAGGAAGCAAGTTGTGCTTATCTTCTCAACCTCGTGAAGTTCTTGACTATAATTTCTCAAGGAAGTCCCATATTGCAGAAGCTGATGCAGAGTTATCCGATTCAGCTTGTTCATCGTTAACAAGGACCATGGTAAAGAAGCACACATGTGCATTTTCTCTTAAAAATACTGAAAGATCAAGTACATGGGAGCTGGATTATGTGAATGACATATTGTGCCATGTGGAATTGATGTATACGGATTTTGCGCTAGGTCGAGCTCGTGAGATTATAAACCCTCATCTATTCAACCTATTGGAAAGTAGAAAGGGAAGTGATAGTGGTGAGTTTAGGACTAGAAGGAAGGTTATATTTGATTGTGTGAGTGAATGTTTGGACTTAAGATGCCGACGATATGTCGGCGGGGGATACAAAATGTGGACTAAAGGCATTGCAATGGTGAGAAGAAATGAATGGTTGGCTAGAGAAGTGTACAAGGAAATTTCAAGTTGGAAGGGTGTGGAAGATTCCATGGTTGATGACCTTGTAGACAGGGATATGAGCAGCCAACATGGACGATGGGTTGATTTTGAGGTTGATACTTTTGCACTAGGTGCAGAGGTTGTTGACCAAATATTTAATTCTTTGGTTGATGATGTTGTATCTGAAATCTTGCAACTACAACAGGTCAAAGATTGTGAATTATTTGTTCATTTGAGAAAATGGGATTAG 2862 0.4032 MGAEKVGTKSEGGVFRLFDWTSKSRKKLFASKSDFPESSKQRRKIDDSLTMKHSYLMREDEDEIGVRASIRGSNDHSYASSVTDDEICGTRTPSVVARLMGLESVPFSGVPDPHSTPYFDSRSLREAQYCRTNLNCQHDHEIPYSGRLLEKDEGSSRNSMGPKLHKNFSRPIEKFQAEVMPPKSAKSIPVTHHKLLSPIKSPGFVPTNNAAYVMEAAARIIKYGPQVTTKVKSPSVASSTVSLRVRDLKEKVKGSPNGPSVETSSLASRVGDHSEKQEISHRTCRLTETSQRSVESNPAKYSKGQSLNKSRERSISSLTEAEEDSSLKDKGKSISLAIQAKMNVQRREGLCLSGGESLADRKENFDITTKLPQKENIQRSMHKKSCGQNASGVLKQNNQKQNCTIDKDKLPSKPLVAGSNNRKVQSVDSSYGSGKSSGGKSIAKSKGGPKNSAIQVKDGEKETLYTRTNNFSIEKRSADRNWNDSVDSLFIDKTVKHAHSNLLSDKHYSCTGEVKKRDIDVVSFTFTTPLTRKTSGFEKSGQTGLKSNGSLNQHNKRVLLETGSTRSPVGYNEAGGGDALGILLEQKLKELTYGCETSSGDSSKARPPSSTASKSNGLVPTMNSVNLIRQLQQKKDQNMLFADAVCSSRESDISFTGLLELQSKHRLWVDEMKECKSNPEEAKSFNCRQPSPISVLEPSFSTESCDSLFRTDAATSSEGSKLCLSSQPREVLDYNFSRKSHIAEADAELSDSACSSLTRTMVKKHTCAFSLKNTERSSTWELDYVNDILCHVELMYTDFALGRAREIINPHLFNLLESRKGSDSGEFRTRRKVIFDCVSECLDLRCRRYVGGGYKMWTKGIAMVRRNEWLAREVYKEISSWKGVEDSMVDDLVDRDMSSQHGRWVDFEVDTFALGAEVVDQIFNSLVDDVVSEILQLQQVKDCELFVHLRKWD* 954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0884 953 MobiDBLite consensus disorder prediction 269 285 - -
Lan12g0884 953 PANTHER EXPRESSED PROTEIN 1 935 - -
Lan12g0884 953 MobiDBLite consensus disorder prediction 315 330 - -
Lan12g0884 953 Pfam DUF761-associated sequence motif 80 110 IPR032795 -
Lan12g0884 953 MobiDBLite consensus disorder prediction 595 618 - -
Lan12g0884 953 MobiDBLite consensus disorder prediction 286 314 - -
Lan12g0884 953 MobiDBLite consensus disorder prediction 247 330 - -
Lan12g0884 953 MobiDBLite consensus disorder prediction 535 555 - -
Lan12g0884 953 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 935 - -
Lan12g0884 953 Pfam Domain of unknown function (DUF4378) 781 929 IPR025486 -
Lan12g0884 953 MobiDBLite consensus disorder prediction 418 440 - -
Lan12g0884 953 MobiDBLite consensus disorder prediction 382 405 - -
Lan12g0884 953 MobiDBLite consensus disorder prediction 374 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0884 Lan-Chr12 15882941 15887988 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0884 9 935 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 30.998 3.38e-87 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0884 - - gmx:102660038 1139.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0884 12 15882941 15887988 Lan12g0884 12 15882941 15887988 ECH
Lan12g0884 12 15882941 15887988 Lan16g0195 16 1532761 1537674 PCT
Lan12g0884 12 15882941 15887988 Lan19g0863 19 16112762 16117532 PCT
Lan16g0195 16 1532761 1537674 Lan12g0884 12 15882941 15887988 PCT
Lan19g0863 19 16112762 16117532 Lan12g0884 12 15882941 15887988 PCT