Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0882 ATGGCATGGCACTCTTATTTCATCTTCACCATCATAACCATGTTATTTGCAACGACGTCGTTTTCCGATGCACAAAACTGCAACGGCGTACTCGTGTCATACGCATACACCGGCGGAGTACGACTACCACCAAACGTCACGGACGCGGCGAAGCAACCGTACCGGTTTCAGTCAATACTGACGGTTCTCAACAACGGACTCGACGAGCTCAAGTCTTGGCAAGTCTTCGTTGGTTTTCAGCACGATGAGTTGTTGGTATCTGCTTCTAATGTGGTGCTCGCTGACGGCACCACCCTCCCCGCCGCCGTTGGAAATGGTACTGTTTTCGCCGGTTATCCTGTGACAGATCTCAAGACTGCGGTGGAGACTGCCGGAGATTTGACTCAGATGGAGGCTCGGATCGAACTTGTTGGCACCGTGTTCGGGGTGGCGCCACCTTCTATCCCGTTGCCTTCTTCCATCAGACTCGCTAATGATGGATTTCAATGTGTCAAAACCACTGGTCAAGGAAAGAATGGGACTAATGTGTGTTGCACGAAAGATCCCAAATTCAAAGCAAACATCACCACAGATGATAAGTACCTGCTCCGTCAACACGGTGATCTCACCATTATGTATGATGTGATCAAAACTGATGATTCTAATTACTGGGCAGAGGTTACAATGGAAAACCATAACCCCCTTGGCCGTCTTGACAACTGGGAGTTGAGCTGGGATTGGATGAATGATGAGTTTATAAATACAATGAAGGGGGCTTATCCATCTGTTGTGGATGTTTCAGATTGTGTGTTTGGTAAGAAGGGTACATTCTATCAGAGTCTTGATTTTTCTTCTGTGTTGAATTGTCAAAAAAGGCCAACCATCATTGATCTCCCTCCCACAAAGTTTAATGATACAGTCCTTGGGAAAGTTCCTTTTTGCTGCCGAAATGGTACTATATTGCCATCATCAATGGACCCTAGCAAGTCTGTTTCGAAATTCCAAATGCAGGTCTTCAAAACGCCCCCCAACTTAAATCGCTCCATGCTTTCACCACCACAGAACTGGCAGATAAATGGTACTCTCAACCCTACTTACAAATGTGGCCCTCCAATCCGTGTGAGACCTACTGAAAATCCAGATCCATCGGGTTTACCATCAGAAATAGTTGTGATGGCCAGTTGGCAGGTTGTGTGCAACATAACTAAGGCCAAAGGTACAGCAAGTAAATGCTGTGTCTCATTTTCAGCCTATTACAATGAATCAGTTATTCCATGCAAAACTTGTGCATGTGGATGCCCCAGTAACACAGCAAGAAATTGTAGTACCACTGCACCAGCTTTGTGGCTTCCATCAGATGCACTTCTTGTTCCTTTTGATAACCGAAGTGCCAAGGCAATTGCTTGGGCTGATTTGAAACATCTACCAGTGTCAAAACCAATGCCCTGTGGTGACAACTGTGGCGTGAGCATCAACTGGCATTTAAATACAGACTATACTAATGGATGGAGTGCAAGGGTCACACTTTTTAATTGGGGAGATACTAATTTTGCAGACTGGTTTGCTGCAGTTGAAATGGACAAAGCAGCTGCAGGTTTTGAGAAAATGTATTCATTCAATGCAACCACACTAGCCATAGCTGGTGTAAATAATACAATATTCATGCAAGGTTTGGAGGGATTGAACTACCTTGTAGCAGAGGCAGATGGAGCTAACCCTCTAAGTGATCCTAGAGTGCCTGGTAAACAACAGTCAGTAATCTCATTCACAAAGAAACCTACCCCTGGAATCAGTGTTGCTCATGGAGATGGGTTTCCCAATAAAGTCTTCTTCAATGGAGAGGAATGCTCTCTTCCTTCAGTGATTCCAAGCAGTGGTTCCAGGAAGGTTCCTTCCTGGGCTACATTGATGCTCTTGTCACTGTTGTTTATCATCTTGAAGCAGCAATAG 1929 0.452 MAWHSYFIFTIITMLFATTSFSDAQNCNGVLVSYAYTGGVRLPPNVTDAAKQPYRFQSILTVLNNGLDELKSWQVFVGFQHDELLVSASNVVLADGTTLPAAVGNGTVFAGYPVTDLKTAVETAGDLTQMEARIELVGTVFGVAPPSIPLPSSIRLANDGFQCVKTTGQGKNGTNVCCTKDPKFKANITTDDKYLLRQHGDLTIMYDVIKTDDSNYWAEVTMENHNPLGRLDNWELSWDWMNDEFINTMKGAYPSVVDVSDCVFGKKGTFYQSLDFSSVLNCQKRPTIIDLPPTKFNDTVLGKVPFCCRNGTILPSSMDPSKSVSKFQMQVFKTPPNLNRSMLSPPQNWQINGTLNPTYKCGPPIRVRPTENPDPSGLPSEIVVMASWQVVCNITKAKGTASKCCVSFSAYYNESVIPCKTCACGCPSNTARNCSTTAPALWLPSDALLVPFDNRSAKAIAWADLKHLPVSKPMPCGDNCGVSINWHLNTDYTNGWSARVTLFNWGDTNFADWFAAVEMDKAAAGFEKMYSFNATTLAIAGVNNTIFMQGLEGLNYLVAEADGANPLSDPRVPGKQQSVISFTKKPTPGISVAHGDGFPNKVFFNGEECSLPSVIPSSGSRKVPSWATLMLLSLLFIILKQQ* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0882 642 PANTHER COBRA-LIKE PROTEIN 7 5 640 - -
Lan12g0882 642 Pfam COBRA-like protein 216 395 IPR006918 GO:0010215|GO:0031225
Lan12g0882 642 PANTHER COBRA-LIKE PROTEIN 7 5 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0882 Lan-Chr12 15872311 15875435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0882 27 622 COBRA Gene Family AT4G16120 68.114 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0882 - - gmx:100814396 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0882 12 15872311 15875435 Lan12g0882 12 15872311 15875435 ECH