Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0867 ATGACCCTTAAGGGTGGCACAACCCAGGCCTGCGCGGCGTGCAAATACCAGAGAAGAAAGTGTACTTCTGAGTGCCTTCTTGCTCCATACTTCCCTGCAGACCAACCCAAGGTATTTCTAAATGTCCACAAACTTTTCGGAGTGAGTAACATTGTAAAGATTTTAAAGATCCTAGAGCCGGATCAGAAAAAAATAGCCATGGACTCTATCATTATTCAATCAAATTACAGGAGTAAGTACCCTGTGCATGGCTGTTGGGAAGAAATCTGCAGGCTGCAATATCAAATTTTGTGGGCGGAAGAAGAGCTTCAAGCTGTTTATCAACAACTCGAGACATGTAGACAACAACAACAAGCCTCCATGCCTGGTTATATGAATGTGACATCACAATTAGACTTGGGAATGGCGACCCCAGATACTAATGCCCTGCCACTCTTCGATCATAGTCCGCAGCCACAAACTTATGATGACACGGTTGCTGCGGTGGCGGCGTTGCCCGCAGTGCAACAACATTCCTACTCCAACAGCAACAGCGTCGATTATAGTAGTGTCGATTATAATAGTTCGCTTTACTTGGAATCCAAGGATGACACCACAAATCCTTTGTGGGTTCAGCATCATCCCTATGCAAATAACAACAACAATTCCATAGTAATGCAATCTCAGTTGGTTGCCTCACAGCAACTAGCCATCCAACATGGAACTGTTGAAGATTATGAACAGATGCATCCACTTTTTGATGCAATTGATGATAGGCAATCATACATTTACTCCAAGGAGGCTTATGAATCAAGTTCAGAAGAATCACTGAAAGATACAAGGAAGTGCACTGATCATTTTGCCAAAAATGAATTGAAGAATGCTGCCGCGTTCTTCAGCCTTACAGGGGTCAATTGA 897 0.4348 MTLKGGTTQACAACKYQRRKCTSECLLAPYFPADQPKVFLNVHKLFGVSNIVKILKILEPDQKKIAMDSIIIQSNYRSKYPVHGCWEEICRLQYQILWAEEELQAVYQQLETCRQQQQASMPGYMNVTSQLDLGMATPDTNALPLFDHSPQPQTYDDTVAAVAALPAVQQHSYSNSNSVDYSSVDYNSSLYLESKDDTTNPLWVQHHPYANNNNNSIVMQSQLVASQQLAIQHGTVEDYEQMHPLFDAIDDRQSYIYSKEAYESSSEESLKDTRKCTDHFAKNELKNAAAFFSLTGVN* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0867 298 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 274 - -
Lan12g0867 298 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 4 274 - -
Lan12g0867 298 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Lan12g0867 298 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0867 Lan-Chr12 15752005 15753509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0867 1 261 AS2 family AT3G47870 38.679 1.28e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lan12g0867 LOB 9.2e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0867 12 15752005 15753509 Lan1g1384 1 23567840 23569074 LSH
Lan12g0867 12 15752005 15753509 Lan1g1994 1 35121359 35123032 LSH