Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0845 ATGGGTCTAAAACTCTTTTTGGTACCCTTCATTGTTATATTTTTGTTCTTTCCAATGACTTATTCAGAAGATGGAGTGGTGAAGCAGGCACTAGTCAGATTCATGGATCAACTTGCAGTAGGGAGTCCACAGAGGAATGCATGGTACTGGGGTTGGAACCTTGCTTCTGATCCATGCACTAGTATTTGGCAAGGTGTGACTTGCTCTGAAGAGGGGTATGTGGAGGCTATAGTTCTTGATGGATCCAGCTTATATGGAACTATAGACTTCACTTCTCTTTGCAAAGCTATGTCTCTTCAAATCCTTAGCTTGAACAGAAACAGTTTACATGGATTTATATCAAAGGACATAGGAGCTTGCAAGTCCTTGACCCATTTGTATTTGAGTGAGAACAACTTCTCTGGTGATCTTCCAAGTTCTCTTGGAGGACTGGAAAATTTGCATTGGCTTCATGTTGCAAACAACAAATTCACAGGAGAGCTTCCTAATATGGTTCATGTTCCAGGGTTGATATCTTTACTTGCTGAAAACAACAAATTCAGTGGTGAAATTCCAGACTTTGACTTCTCCAAACTTATGGAGTTTAATGTCTCCAACAACAATTTGGAGGGTCTGATTCCTGATGTGAAAGGAAAATTCCAATCAGACAGTTTTTCTGGAAATCGAAATTTATGTGGAAATCCACTTCCAATGGCCTGTCCCCCTACCCCTCCAAAGAAAGATAGAGAATCACTCATCAATAGTTTGGCTATTTATTCAGGTTATGCACTTCTTGCTTTAATTATCCTGTTTTTCTTTGCCTACAAATTGATAAGGAAATTCAAGGCCAAAAAAGAACCATTAATTGTTAACAAGGAAGTGACACATGAACCTAGTGGTGTAACTCCTACCGAATTTTCCTTCGAAAATAAGAGTGGCATTGAGATGAAATCGGAGTATTCAATGACATCCCTTGAAAGTGAAATGAACACATCAACTCTTGTTGTTCTTTCAAGCCCAGGACCATATGCATTGCGATTTGAGGACATACTCAGAGCACCAGCTGAGTTGGTTGGGAGAGGAATGCATGGAAGCCTCTACAAGGTGTGGCTAGACAATGGAGTGTTCTTAGCAGTCAAGAGGATCAGGGATTGGGGAATTTCTAATCAAGATTTTGAGAGAAGGATGAACAAGATTAGCCAGGTGAAGCATCCTTATGTAATGTCACCTGTTGTATATTATTGCTCCAGGCTAGAGAAGCTCCTAGCATATGAATACATGGAGAATGGGAGTCTCTTCAAGATGCTCCATGGATCTCAAAGTGGCCAATCATTTGACTGGGGAAGCAGACTTAGCATTGCTGCCAATATAGCTGATGCTTTGGCATATATGCATGAGGAGCTTCGTGAAAGTGGAATAGCTCATGGTAACATAAAATCAAACAACATTTTGTTTAGCAAAAATATGGATCCATGCATAAGTGAATATGGTCTAATGGTGATTGAAACTCAAGCTCAGAGTGCTTTATCTCGCACAAGAAGTAAAAAAAGCAACAATGTCACTACTCATGGTGCATATAGCACCTTTAAAGTTGATGTATATGCCTTTGGTGTGATACTTCTTGAGCTGTTAACAGGAAAAGTAGTTCAAGAAAACAGTGGATTTGATCTGGCTCAATGGGTGAATTCAGTGGTCAGAGAGGAATGGACTGTTGAAGTTTTTGACAAGCACTTAATCTCTCAAGGTGCAAGTGAAGAGAGGATGGTGAACATGTTGCAAGTGGCATTTAAATGCATAAATCCTTCCCCAGATGAAAGACCAAGCATGATTGAAGTTGCAGCTATGACAATTTCTTTGAAAGAGGAAGATGATAGATCATCCATAACCTTCTAG 1872 0.399 MGLKLFLVPFIVIFLFFPMTYSEDGVVKQALVRFMDQLAVGSPQRNAWYWGWNLASDPCTSIWQGVTCSEEGYVEAIVLDGSSLYGTIDFTSLCKAMSLQILSLNRNSLHGFISKDIGACKSLTHLYLSENNFSGDLPSSLGGLENLHWLHVANNKFTGELPNMVHVPGLISLLAENNKFSGEIPDFDFSKLMEFNVSNNNLEGLIPDVKGKFQSDSFSGNRNLCGNPLPMACPPTPPKKDRESLINSLAIYSGYALLALIILFFFAYKLIRKFKAKKEPLIVNKEVTHEPSGVTPTEFSFENKSGIEMKSEYSMTSLESEMNTSTLVVLSSPGPYALRFEDILRAPAELVGRGMHGSLYKVWLDNGVFLAVKRIRDWGISNQDFERRMNKISQVKHPYVMSPVVYYCSRLEKLLAYEYMENGSLFKMLHGSQSGQSFDWGSRLSIAANIADALAYMHEELRESGIAHGNIKSNNILFSKNMDPCISEYGLMVIETQAQSALSRTRSKKSNNVTTHGAYSTFKVDVYAFGVILLELLTGKVVQENSGFDLAQWVNSVVREEWTVEVFDKHLISQGASEERMVNMLQVAFKCINPSPDERPSMIEVAAMTISLKEEDDRSSITF* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0845 623 Pfam Protein kinase domain 349 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0845 623 Gene3D Ribonuclease Inhibitor 171 236 IPR032675 -
Lan12g0845 623 Gene3D Phosphorylase Kinase; domain 1 315 419 - -
Lan12g0845 623 SUPERFAMILY Protein kinase-like (PK-like) 349 608 IPR011009 -
Lan12g0845 623 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Lan12g0845 623 Gene3D Ribonuclease Inhibitor 27 170 IPR032675 -
Lan12g0845 623 PANTHER OS05G0588300 PROTEIN 6 620 - -
Lan12g0845 623 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Lan12g0845 623 SUPERFAMILY L domain-like 47 226 - -
Lan12g0845 623 Gene3D Transferase(Phosphotransferase) domain 1 420 622 - -
Lan12g0845 623 ProSiteProfiles Protein kinase domain profile. 345 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0845 623 PANTHER LRR RECEPTOR-LIKE KINASE 6 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0845 Lan-Chr12 15526055 15529439 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0845 4 620 Receptor kinase-like Gene Family AT5G58300 34.462 1.43e-96 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan12g0845 Pkinase 7.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0845 - - adu:107492411 741.88