Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0838 ATGAAAAATCTTTACTTGTTCAAAGAAATTTCAAACCATGTGAAATCAGGGAGAAGGCTTTCATTGGGTGAATACAAGAGAGCAATATCTTGGTCCAAGTATTTGGTCTCTTCAGGAGCTGCCATAAAGGGAGAAGAAGAAGAGGAATGGAGTGCTGATATGTCTAAGTTGTTTATTGGTTCTAAATTTGCTTCTGGAAGACATAGCAGAATCTATAGAGGCATTTATAAGCATATGGATGTGGCAATTAAGGTTGTGAGTCAACCTGAAGAGGATGAGGATTTGGCAGTGTTGCTTGAGCAACATTTTACTTCTGAGGTTGCTTTGCTCTTTCGATTGCGCCATCCGAATATCATTACTTTTGTTGGAGCTTGCAAGAAACCTCCTGTGTTTTGTATAATTACAGAATATATGGCTGGGGGCTCATTGAGAAATTACCTGCATCATCAAGGGCCACATTCACTTCCTCTCCAACTTGTTTTGAAATTAGCCCTTGACATTGCACGAGGGATGCAATATCTTCATTCTCAGGGTGTACTCCATAGGGATCTCAAATCAGAAAATCTGCTGTTAGATGAAGATATGTGTGTCAAAGTGGCAGATTTTGGGATCTCTTGCTTGGAATCTCAGACTGGCAGCTCAAAAGGATTCACCGGAACTTATCGTTGGATGGCACCTGAAATGATCAAAGAAAAGCGCCATACCAAAAAAGTAGATGTCTATAGTTTCGCCATAGTTCTATGGGAACTTTTAACTGGACTGACACCATTTCACAACATGACACCCGAGCAGGCAGCATTTGCAGTGTCTCACAAGAATGCAAGGCCTCCTTTACCATGTGACTGTCCATATGCACTTACTCGTCTCATAAGCAGATGTTGGTCAAGTAATCCACATAAACGGCCACATTTTGATGAAATAATATACATCTTGGAGAATTACACTGAATCACTTGAACAGGATCCTGAATTTTTCTCCACTTACAAACCAAGCCCTAGTAACATAATTGTGAGATGCTTACCAAAATGTAATGCTGGCCATAAATCTGCTTCTTACAAAGTTTAG 1065 0.4019 MKNLYLFKEISNHVKSGRRLSLGEYKRAISWSKYLVSSGAAIKGEEEEEWSADMSKLFIGSKFASGRHSRIYRGIYKHMDVAIKVVSQPEEDEDLAVLLEQHFTSEVALLFRLRHPNIITFVGACKKPPVFCIITEYMAGGSLRNYLHHQGPHSLPLQLVLKLALDIARGMQYLHSQGVLHRDLKSENLLLDEDMCVKVADFGISCLESQTGSSKGFTGTYRWMAPEMIKEKRHTKKVDVYSFAIVLWELLTGLTPFHNMTPEQAAFAVSHKNARPPLPCDCPYALTRLISRCWSSNPHKRPHFDEIIYILENYTESLEQDPEFFSTYKPSPSNIIVRCLPKCNAGHKSASYKV* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0838 354 CDD STKc_MAP3K-like 64 311 - -
Lan12g0838 354 Gene3D Transferase(Phosphotransferase) domain 1 140 336 - -
Lan12g0838 354 ProSiteProfiles Protein kinase domain profile. 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0838 354 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 333 - -
Lan12g0838 354 Pfam Protein tyrosine and serine/threonine kinase 59 309 IPR001245 GO:0004672|GO:0006468
Lan12g0838 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Lan12g0838 354 PANTHER SERINE-THREONINE PROTEIN KINASE 1 333 - -
Lan12g0838 354 SMART serkin_6 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0838 354 Gene3D Phosphorylase Kinase; domain 1 46 139 - -
Lan12g0838 354 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Lan12g0838 354 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Lan12g0838 354 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Lan12g0838 354 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Lan12g0838 354 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Lan12g0838 354 SUPERFAMILY Protein kinase-like (PK-like) 45 310 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0838 Lan-Chr12 15472495 15478469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0838 30 320 MAP Kinase Kinase Kinase AT1G62400 64.068 8.54e-136 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lan12g0838 PK_Tyr_Ser-Thr 1.2e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0838 - - gmx:100785212 629.017