Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0823 ATGCCTGAAAATCCATGGACCCTCTTCTTCTTATCCATTCTCCTTTTACTTCAATACAATTATTTTATAGCTCTTGCAGTAAACCAACAAGGGGAAGCTCTTCTTTCTTGGAAGAGAACCCTGAATGGATCCCTGGATGTGCTGAGTAATTGGGACCCAATTGAAGTCACACCATGTAGCTGGTTTGGAGTGAGCTGCAACTTGAAGAACGAAGTGGTACAATTAGATCTCAGGTATGTGGATTTGCTTGGAACACTTCCTTCAAATTTCACCTCATTGTTTACATTGAGCAAGTTAATCTTAACCGGAACGAACCTCACCGGTTCAATCCCGAAAGAGATAAGCAACCTTGATCAACTCAGCTACTTGGACCTAAGTGACAATGCCTTGTCTGGAGAAATTCCAAGTCAGCTCTGCTACTTTACAAAACTTGAGGAACTCCATCTCAACTCCAACAATCTGGTAGGGTCTATTCCACTTGCCATTGGGAACCTCACAAACTTGAAGAAGCTGATCCTATATGACAATCAACTTAGTGGTGTAGTTCCAAGCACCATTGGAAACTTGAAAAGCCTAGAAATTCTCAGGCTTGGGGGAAACAAGAACATAGAAGGTTCTATCCCACAGGAAATTGGAAACTGTTCCAATTTGGTAATGATGGGTCTAGCTGAAACAAGCATCTCAGGTTTTCTACCCCAAAGTATTGGCCTACTCAGAAAGCTTGACACTATTGCCATTTACACTTCCTTCTTATCCGGCCAAATACCCTCAGAACTTGGTGACTGCACAAACCTACAAAACATCTACCTTTATGAAAATTCCCTCACCGGTTCCATACCCAACAAATTAGGAAACCTTAAAAGCCTCAAAAACCTTCTACTCTGGCAGAACAACCTAGTTGGCACAATCCCACCAGAGATTGGAAACTGTAACCAGTTATCAGTGATTGATGTGTCAATGAACTCAATAACTGGAAGCATTCCCAAAAGTTTCGGCAACTTGACATCGTTACAAGAACTTCAACTCAGTATGAATCAAATTTCTGGGGAAATCTCAGCAGAGCTAGGTAACTGTCACCAACTGACTCATATACAGCTTGACAATAACCTAATCACGGGTACGATTCCTTCCGAATTTGGAAACCTAGGGAATCTTACGCTGTTATTCCTTTGGCATAACAAGCTTCAAGGTAACATACCCTCTTCACTTTCCAATTGTCAGAATCTAGAAGGACTTGATCTGTCTCAGAATTCATTGACGGGTCAAATTCCAAAAGGGATATTCAAGTTGAAGAATCTCAACAAGCTTTTGCTTCTCTCAAACAATCTCTCTGGGAACATAGCTTCTGAGATTGGGAACTGTTCCTCTCTGATTCGGTTCCGAGCGAGTGATAACCAAATCACTGGGAATATTCCACCGCAGATTGGGAATCTCAAGAATTTGGATTTCTTGGACCTCGCTTCCAACCGGATTTCGGGATTTATACCTGAAGAAATCTCTGGCATTCAGAATCTCACGTTTCTGGATTTGCATTCTAACTTTATCGTCGGGAACTTGCCGAAAAGTCTGAGCCAGCTTGTTTCGCTTCAATTTCTCGATGTCTCTGAAAACATGATCGAAGGAACATTGAACCCTAGCCTTGGATCCCTTGCCGCTCTCACGAAACTGGTTCTAGGGAAGAATCGTATCTCCGGTTCAATTCCGAGTCAACTCGGTTCTTGCGCGAAGCTACAGTTGCTGGATTTAAGTAGCAACCAGATTTCCGGAAAAATCCCTGGCAGTTTAGGGAACATTCCGGCATTGGAAATAGCTCTGAATCTGAGCTTGAACCAACTCTCCGGTGAGATCCCCAAGGAGTTTTCAGATTTGACGAAGCTCGGAGTTTTGGATATATCTCATAACGTTCTCACCGGAAACCTTAATTATCTCGCCGGATTGCAATATCTCGTGGTACTGAATATCTCGTACAATAAATTCTCCGGTCGCATTCCTGAAACAACTTTCTTCACGAAGCTTCCCCTGAGCGTACTCGCCGGCAACCCCTCGCTGTGCTTCGCCGGAAACCAATGCGCCGGCGACGGAAACGGAAAATCAAGGAAGCACGCAAAGGAGGCGCGTGTAGCCATGGTGGTCCTGCTATGCATCGCTTGCACGCTTCTATTGGCGGCATTGTACGTCGTCGTCTCGGCAAAACGACGAGGGGACGGAGAAAACGACATCGAAATGGATGGAAAAGACAGTGACGTGGACATGGCCCCACCTTGGGAAGTGACACTGTACCAGAAACTCGACCTGTCAATTTCTGACGTGGCAAAATGTCTCTCTGCTTGCAACGTCATAGGGCAGGGTCGATCCGGCGTCGTTTACAAAGCGAACATGGCAGCGACAGGGTTAACTATCGCAGTGAAGAAGTTTAAGTCATCAGAGAAATTCTCTGCGGCGTCGTTTTCATCGGAGATTGCCACGCTGGCACGAATCCGTCACCGGAATATTGTGCGCCTTTTGGGTTGGGGTGCTAACCGGAGAACCAAGTTACTGTTCTATGATTATTTACCCAACGGTAATTTGGACACGCTGTTACACGAGGGGTGCACAGGATTAATAGAATGGGAGACGCGGTTGAAGATAGCATTGGGCGTGGCTGAGGGAGTGGCTTACTTGCACCACGATTGCGTCCCTGCTATCTTGCACCGGGACGTGAAAGCGATGAATATTCTGTTAGGAGACAGATATGAACCGTGTTTGGCTGATTTTGGATTCGCTCGGTTCGTTGAAGAAGATCACGCTTCGTTTTCCGTTAACCCACAGTTCGCTGGTTCTTACGGCTACATTGCTCCTGAGTATGCTTGCATGCTTAAGATCACAGAGAAGAGCGATGTGTACAGTTTTGGGGTGGTCCTACTAGAGATAATAACAGGGAAAAGACCTTGTGATCCATCATTTCCGGAAGGGCAACATGTTATTCAGTGGGTCAGGGAGCACTTAAAGAGCAAGAAGGACCCAATTGAGGTGCTGGATCCCAAGCTTCAGGGTCATCCAGACACACAAATACAAGAGATGTTACAAGCACTTGGTATATCTCTTCTGTGTACAAGTAATCGTGCTGATGATAGACCTACAATGAAAGATGTTGCAGCATTGTTAAGAGAAATTAAACATGATCCTCCATCAGGGTCTGAAGCCAACAAGCTTAAAAGAACTGAAGCTTCATCCTATTCATCTTCCTCAATTACTCCGGCTCAGTTGTTACTCCTTCAATCCGCTTCTCATTCGTCATCATTCGCTTATTCATCTTCCTCTGCAGCAGCCTATCACCCACCAAGGAATCAATCATGA 3336 0.4502 MPENPWTLFFLSILLLLQYNYFIALAVNQQGEALLSWKRTLNGSLDVLSNWDPIEVTPCSWFGVSCNLKNEVVQLDLRYVDLLGTLPSNFTSLFTLSKLILTGTNLTGSIPKEISNLDQLSYLDLSDNALSGEIPSQLCYFTKLEELHLNSNNLVGSIPLAIGNLTNLKKLILYDNQLSGVVPSTIGNLKSLEILRLGGNKNIEGSIPQEIGNCSNLVMMGLAETSISGFLPQSIGLLRKLDTIAIYTSFLSGQIPSELGDCTNLQNIYLYENSLTGSIPNKLGNLKSLKNLLLWQNNLVGTIPPEIGNCNQLSVIDVSMNSITGSIPKSFGNLTSLQELQLSMNQISGEISAELGNCHQLTHIQLDNNLITGTIPSEFGNLGNLTLLFLWHNKLQGNIPSSLSNCQNLEGLDLSQNSLTGQIPKGIFKLKNLNKLLLLSNNLSGNIASEIGNCSSLIRFRASDNQITGNIPPQIGNLKNLDFLDLASNRISGFIPEEISGIQNLTFLDLHSNFIVGNLPKSLSQLVSLQFLDVSENMIEGTLNPSLGSLAALTKLVLGKNRISGSIPSQLGSCAKLQLLDLSSNQISGKIPGSLGNIPALEIALNLSLNQLSGEIPKEFSDLTKLGVLDISHNVLTGNLNYLAGLQYLVVLNISYNKFSGRIPETTFFTKLPLSVLAGNPSLCFAGNQCAGDGNGKSRKHAKEARVAMVVLLCIACTLLLAALYVVVSAKRRGDGENDIEMDGKDSDVDMAPPWEVTLYQKLDLSISDVAKCLSACNVIGQGRSGVVYKANMAATGLTIAVKKFKSSEKFSAASFSSEIATLARIRHRNIVRLLGWGANRRTKLLFYDYLPNGNLDTLLHEGCTGLIEWETRLKIALGVAEGVAYLHHDCVPAILHRDVKAMNILLGDRYEPCLADFGFARFVEEDHASFSVNPQFAGSYGYIAPEYACMLKITEKSDVYSFGVVLLEIITGKRPCDPSFPEGQHVIQWVREHLKSKKDPIEVLDPKLQGHPDTQIQEMLQALGISLLCTSNRADDRPTMKDVAALLREIKHDPPSGSEANKLKRTEASSYSSSSITPAQLLLLQSASHSSSFAYSSSSAAAYHPPRNQS* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0823 1111 ProSitePatterns Protein kinases ATP-binding region signature. 780 804 IPR017441 GO:0005524
Lan12g0823 1111 SUPERFAMILY Protein kinase-like (PK-like) 763 1051 IPR011009 -
Lan12g0823 1111 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 1068 - -
Lan12g0823 1111 Pfam Leucine rich repeat 480 539 IPR001611 GO:0005515
Lan12g0823 1111 Pfam Leucine rich repeat 143 201 IPR001611 GO:0005515
Lan12g0823 1111 Pfam Leucine rich repeat 553 612 IPR001611 GO:0005515
Lan12g0823 1111 Pfam Leucine rich repeat 288 347 IPR001611 GO:0005515
Lan12g0823 1111 ProSitePatterns Serine/Threonine protein kinases active-site signature. 895 907 IPR008271 GO:0004672|GO:0006468
Lan12g0823 1111 Gene3D Ribonuclease Inhibitor 29 138 IPR032675 -
Lan12g0823 1111 Gene3D Transferase(Phosphotransferase) domain 1 851 1073 - -
Lan12g0823 1111 SMART LRR_typ_2 286 310 IPR003591 -
Lan12g0823 1111 SMART LRR_typ_2 407 430 IPR003591 -
Lan12g0823 1111 SMART LRR_typ_2 165 188 IPR003591 -
Lan12g0823 1111 SMART LRR_typ_2 502 526 IPR003591 -
Lan12g0823 1111 SMART LRR_typ_2 382 406 IPR003591 -
Lan12g0823 1111 SMART LRR_typ_2 550 574 IPR003591 -
Lan12g0823 1111 SMART LRR_typ_2 478 501 IPR003591 -
Lan12g0823 1111 SMART LRR_typ_2 117 141 IPR003591 -
Lan12g0823 1111 SMART LRR_typ_2 334 358 IPR003591 -
Lan12g0823 1111 SMART LRR_typ_2 189 214 IPR003591 -
Lan12g0823 1111 ProSiteProfiles Protein kinase domain profile. 774 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0823 1111 Gene3D Ribonuclease Inhibitor 222 325 IPR032675 -
Lan12g0823 1111 Pfam Protein kinase domain 778 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0823 1111 SMART serkin_6 774 1057 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0823 1111 SMART LRR_sd22_2 478 504 - -
Lan12g0823 1111 SMART LRR_sd22_2 334 357 - -
Lan12g0823 1111 SMART LRR_sd22_2 262 288 - -
Lan12g0823 1111 SMART LRR_sd22_2 165 191 - -
Lan12g0823 1111 SMART LRR_sd22_2 406 435 - -
Lan12g0823 1111 SMART LRR_sd22_2 117 149 - -
Lan12g0823 1111 SMART LRR_sd22_2 574 600 - -
Lan12g0823 1111 MobiDBLite consensus disorder prediction 1052 1074 - -
Lan12g0823 1111 SUPERFAMILY RNI-like 75 372 - -
Lan12g0823 1111 Gene3D Ribonuclease Inhibitor 326 425 IPR032675 -
Lan12g0823 1111 Gene3D Ribonuclease Inhibitor 139 221 IPR032675 -
Lan12g0823 1111 SUPERFAMILY RNI-like 327 666 - -
Lan12g0823 1111 PANTHER OS01G0170300 PROTEIN 8 1068 - -
Lan12g0823 1111 Gene3D Phosphorylase Kinase; domain 1 755 850 - -
Lan12g0823 1111 Gene3D Ribonuclease Inhibitor 426 695 IPR032675 -
Lan12g0823 1111 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0823 Lan-Chr12 15362473 15367184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0823 25 1101 Receptor kinase-like Gene Family AT5G56040 53.775 0.0 1128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lan12g0823 Pkinase 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0823 - - gmx:100778064 1738.39