Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0804 ATGGAGATGGAACGCGTATTCGAATTTCCTCACACTCACATGGATCGGCGCCCAAGAAAGAGACCAAGATTGGGCTGGGACATCCCTGAGGTACCCAAGGCTCAGGTAGGATTGTTTTTTGGACAAGAGATTGGGAATATTTCAAGCTATGCTCCTTCAAGGGGTCCCTCTGAACATACCACTAGCTCTCTATTTGTTAAGGGAGTTGCTCGAAATGGTTCTCCCCCATGGCGAGAAGATGACAAAGATGGGCATTACATGTTTGCGATTGGAGATAATTTAACTTCTCGCTATAAGATCCACAGCAAAATGGGAGAAGGAACTTTTGGGCAGGTGTTGGAATGCTGGGACAGAGAAAGGAAGGAAATGGTTGCCATAAAAATTGTCCGTGGGATAAATAAGTACCGAGATGCAGCCATGATTGAAATTGAGGTACTGCAACAGCTTGGCAAACATGATAAAGGTGGCAATCGTTGTGTGCAATTACGGAACTGGTTTGACTATCGTAATCATATATGTATTGTGTTTGAGAAACTTGGGCCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTCCGTGAGATTGGAAGACAACTATTGGAATGTATAACATTCATGCACGACTTGTCCATGATCCATACTGATCTCAAGCCTGAGAACATACTTTTAGTATCACCGGAGTATGTCAAAGTTCCTGATTACAAGAGTTCATCCAGGTCACCAAGTTCCTATTTTAAAAGGGTGCCCAAGTCAAGTGCTATTAAAGTAATTGATTTTGGCAGCACCACATATGAGAGAGAAGATCAGAATTACATAGTATCAACTCGTCATTATAGGGCACCTGAAGTTATCCTCGGACATGGCTGGAGTTATCCGTGTGATATATGGAGTGTGGGATGTATATTGGTTGAATTATGCACGGGTGAAGCTTTGTTTCAGACTCATGAGAATTTAGAGCACCTTGCAATGATGGAGAGGGTGCTTGGGACATTACCACAACACATGTTGAAGAGACTTGACCGACATGCCGAGAAGTATGTTAGAAAGGGTAGATTAGACTGGCCAGAGGGTGCAGCCTCAAGGGAAAGTATTAAAGCTGTGATGAAGCTTCCTAGGCTGCAGAACCTCATTATGCAGCACGTTGATCATTCAGCTGGTGATCTTATACATCTCTTGCAGGGATTACTTAGGTTTGACCCCTCTGAAAGACTTACTGCTAAGGAAGCTCTCAGACATTCTTTCTTTAGAGATCACCTTAGGAGATGA 1290 0.4295 MEMERVFEFPHTHMDRRPRKRPRLGWDIPEVPKAQVGLFFGQEIGNISSYAPSRGPSEHTTSSLFVKGVARNGSPPWREDDKDGHYMFAIGDNLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGINKYRDAAMIEIEVLQQLGKHDKGGNRCVQLRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECITFMHDLSMIHTDLKPENILLVSPEYVKVPDYKSSSRSPSSYFKRVPKSSAIKVIDFGSTTYEREDQNYIVSTRHYRAPEVILGHGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGTLPQHMLKRLDRHAEKYVRKGRLDWPEGAASRESIKAVMKLPRLQNLIMQHVDHSAGDLIHLLQGLLRFDPSERLTAKEALRHSFFRDHLRR* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0804 429 Gene3D Transferase(Phosphotransferase) domain 1 152 423 - -
Lan12g0804 429 SMART serkin_6 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0804 429 SUPERFAMILY Protein kinase-like (PK-like) 85 426 IPR011009 -
Lan12g0804 429 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Lan12g0804 429 MobiDBLite consensus disorder prediction 1 21 - -
Lan12g0804 429 ProSiteProfiles Protein kinase domain profile. 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0804 429 PANTHER KINASE AFC1 1 429 - -
Lan12g0804 429 CDD PKc_CLK 85 423 - -
Lan12g0804 429 Pfam Protein kinase domain 98 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0804 429 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 429 - -
Lan12g0804 429 Gene3D Phosphorylase Kinase; domain 1 85 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0804 Lan-Chr12 15211183 15214678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0804 263 423 EF-hand Containing Proteins AT5G22840 31.461 1.44e-17 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Lan12g0804 Pkinase 1.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0804 K08287 - gmx:100804452 827.394