Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0802 ATGCTGCTAATTGTCTTTCTGACCTTGCTTATCCTATTTCTCATAACCAAATGGTATTACAATTCTACAAGCACCCATATCAAACCCCCTTCTCCTCCTAAACTCCCAATAATTGGAAATCTACATCAACTTGGCTTGTACCCTCACCGCACACTCCATTCTTTAGCCAAAAAATATGGTGTCTTAATGCTTCTTCATCTTGGGAAGGTGCAACTTCTTGTAATCTCATCTGCTGATGTTGCACGTGAAATAATGAGAACCCATGACCGTGTCTTCTCAAACAGGCCTCATATTAAAATGTTTGACATACTTTTATATGGTTCCAAAGATGTTTCAGCATCCCCATATGGTGAGTATTGGAGGCAGATAAGGAGCATATGTGTCTTACATCTTCTTAATATCAAACGGGTTCAATCTCTTCGTGATGTGAGACAAGAGGAAGTTGCTTTATTGATTGAAAAAATCATGCACTCTTGTTCTTCCTCGTTGCCAATGAACTTAAGTGGATTACTCTCCGCGGTTACCAATGATATAGTTTGTAGAGTGGCTTTGGGAAGAAAATATGGTGGAGAAAGTGGAAGGGGATTCAAAGAAGTATTGTTGGAGTTTACAGAGTTGCTTGGAACTTTTGTTGTTGGGGATTATGTGCCTTGGCTTGATTGGTTGAGCCATATTTCTGGATTATATGCTAGAGCAAACAGAGTGGCTAAACAAATAGATGAATTTTTGGACCATGTAATTGAGGAGCATATAAATATTCAAAAAGGAGACAGCAATGGACATGCTAGTTCATATTCTGAAGGTCATAAAGATTTTGTGGATGTTTTGCTTTGGATTCAGGAGACAAACTCAATTGGTTTTCCAGTTGACCGTACTGTCATAAAGGCTTTGATATTAGACATGTTTGCTGCAGGTACAGACTCAACATCTACGTCCCTAGAGTGGGCAATGACAGAACTCATAAGGCATCCAAATGTAATGAAAATACTGCAAGAGGAAGTAAGGAATGTGGCTGGTAATAGAACCCACATAACTGAAGATGATTTAGGTCACATGCCTTACTTAAAGGCTGTGATTAAGGAAACTCTACGCTTACATCCACCAATTCCACTACTAGTCCCACGTGAAAGCATGCAAGATATCACTCTTAAGAGGTACCACATTGCAGCTGGGACAAGAGTAATTATCAATGCTTGGGCCATTGCAAGAGATCCTACATATTGGGATGAACCTGAAGAGTTTAAACCTGAAAGGTTCTTGGATAGTTCAATAGATGTCAAAGGTAATGATTTCCAATTGATACCATTTGGAGCTGGGAGAAGGGGTTGCCCAGGAACAATGTTTGCTATGGTTGTGAATGAGATTGTGCTAGCAAATCTGGTCCATCAATTTGATTGGGCACTAGTTGGTGGAATTGCAGGGAATGAGAGCTTGGACATGTCTGAAACAGTTGGTTTAACCATGCATAGAAAGACTCCTCTTATAGCATTTGCGACACCATATCAGAAGTGTGATTAG 1518 0.3986 MLLIVFLTLLILFLITKWYYNSTSTHIKPPSPPKLPIIGNLHQLGLYPHRTLHSLAKKYGVLMLLHLGKVQLLVISSADVAREIMRTHDRVFSNRPHIKMFDILLYGSKDVSASPYGEYWRQIRSICVLHLLNIKRVQSLRDVRQEEVALLIEKIMHSCSSSLPMNLSGLLSAVTNDIVCRVALGRKYGGESGRGFKEVLLEFTELLGTFVVGDYVPWLDWLSHISGLYARANRVAKQIDEFLDHVIEEHINIQKGDSNGHASSYSEGHKDFVDVLLWIQETNSIGFPVDRTVIKALILDMFAAGTDSTSTSLEWAMTELIRHPNVMKILQEEVRNVAGNRTHITEDDLGHMPYLKAVIKETLRLHPPIPLLVPRESMQDITLKRYHIAAGTRVIINAWAIARDPTYWDEPEEFKPERFLDSSIDVKGNDFQLIPFGAGRRGCPGTMFAMVVNEIVLANLVHQFDWALVGGIAGNESLDMSETVGLTMHRKTPLIAFATPYQKCD* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0802 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Lan12g0802 505 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0802 505 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0802 505 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0802 505 Pfam Cytochrome P450 29 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0802 505 PANTHER CYTOCHROME P450 FAMILY PROTEIN 4 502 - -
Lan12g0802 505 PANTHER CYTOCHROME P450 71B11-RELATED 4 502 - -
Lan12g0802 505 SUPERFAMILY Cytochrome P450 29 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0802 505 Gene3D Cytochrome P450 15 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0802 505 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0802 505 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0802 505 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0802 505 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0802 505 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0802 505 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0802 505 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0802 505 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lan12g0802 505 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0802 Lan-Chr12 15199513 15201930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0802 30 499 Cytochrome P450 AT3G48270 52.866 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0802 - - gmx:100819183 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0677 3 11252260 11269033 Lan12g0802 12 15199513 15201930 PCT