Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0793 ATGATGGATGGGAGGAGGCATTCAGTTGATATTCCTATTTCTAAAACTCTTGTAGCACTGAGAAGGGTTAGATCATTGAGGGATCCTTCAGCTAATTGTATTAGCAAACTTTCTCCTTTGATTGATAATGTACATTGGGAAAATGGTTCGGGTAATGGGTTTTCGTTGCGATTTCTTGAGGCTCCTCATGCACATGGTTCTGATGATGATGGTATTTTAAGAACCAAGAATGCGGATTTTAATGGGCAAAGAGAGCAGGATACTACTGATTTTGAATTGAATTGTGGCCTTTTGAAGTCCAAGCTGAACTATTATGGGATTTCGGGTAAGGAAGGGCAGCGAGATGATGAACTGCGTTACTTTAATCCTAATCTGGAAGGCATTTCAGGAAATAAATCACCAAGTGAAAGCTGTTGTAGCAACCATGGGGGCAGAGGATTGGATTTGGCTTGCATCATGCCTCCTATTAATCATTTGAGGAATGAGGAATCATGCTATTCATCAACTGCATTGTCATCACAATTAGGGAGAATAGAATACTCGAAGTCAACCCGAAAGTCACTATGCAAGAATCAAGTGAAACGATCTGAAATGATGGGTGATATTGCAAGCCAAGCAGGGAGTCCATGCCTTCCTGTTGGTGATGCTCTCTCAACGCGTAGCGCTTCACCATATATAACTGAAGGTGTAGATGTTTTAGATAATCATGATGGATGTGGAATAAGCTGTTGTTGGTCAAAATCACCAAGGTTTAGAGAATCAAATCATTATTCTGAAAAAGAAGACCTTCCCTTGATGTTGAAGCATGTTAATGAGAAAGATCATTATGAACATAGAAGCATGAGAGACATTGGTGGTGGAACTAGTCCAAATTTGGAAACTCCTAGAAGTTTATGTATGAAATTCAAGCCAAAATCTTTCACTGACTTGGTAGGACAAAATGTGGTAGGAAGATCGCTTTTAGGTGCCATTTCTAGAGGAAGGATAACATCATTTTATCTCTTCCATGGTCCTCGTGGTACAGGCAAGACATCTGCTTCTAGGATCTTTGCCGCTGCATTGAATTGTCTCTCCCTTGAGGAGCAAAAGCCATGTGGCCTATGTAGAGAATGTGTTTTGATCTTTTCTGGAAGAAGTAAAGATGTTAAGGAAGTGGATTCTTTTGGACTCAATCGTGTAGACAAGGCTAAATCCCTGGTTAAGAATGCATGCATACCTCCAGTTTCCTCACGCTTTAAGGTGTTCATTATTGATGAGTGCCAGTTTTTGCAAGGGGAAACATGGGTTATTATTTTGAATAGCCTAGAGAAATTTCCCCAACATGTGGTTTTTGTGATGATCACTCCTGAATTGGATAAACTTCCTCGAAGTGCAGTCTCGCGGGCTCAGAGGTATCACTTTCCGAAGATTAAAGATGCTGATATTGCAAGAAGATTGGAAAAAATTTGTGTTGAAGAAAGTCTTGATTTTGAACAAGTGGCCTTGGACTTCATTGCTGCTAAATCATTTGGTTCTCTTAGGGATGCAGAAATGATGCTTGATCAGCTGAGTTTGCTTGGTAAAAAAATCACGACTTCCTTAGCTTATGAGCTTACCGGTGTTGTTTCTGATGAAGAATTGCTTGAATTGTTGGACCTGGCTTTGTCATCTGACACTTCAAATACAGTTATAAAAGCCCGGGAGCTTATGAGATCACGGATAGATCCTCTACAACTTATGTCACAGCTGGCAAATCTTATTATGGACATTCTTGCAGGGAAACATGAAGTTGGTGGTTCTGAAATCAGCAGAAGATTTTCTAGTAGACATACCTCGGAAGCAGACCTGCAGAAACTAAATCATGCAGTAAGAATACTTTCTGAAACAGAGAAGCAGTTGAGAATTTCTAAGAATCAAACAACATGGTTCACTGCAGCTCTTTTACAACTAAGCTCTGTGGAATGTTCTTCTGTGAATGCAAATGATACCAAGTTATGTTTGAGAGCTGCATCCATTCAAGATGGGGATTTATGTAATACGTCGTCTACAGGGGAGAGCCTGAAGCATGCTTCTATAGGTCAGTGTGATGACAAGTCATATAGATTAGGAGTGCAGGAGGGTCATAGAGGAACACCGGACTCCATATGGTATAGTGCTACACAGATATGTCGATCTAGCCGGCTCAAGAAATTTCTCAGGAAGCAGGGGAAGTTGTCTTCACTTTGGGTTAATGAAGGCCATGCAGTTGCTGAGTTGGAATTCCATCACCATGACTTTGTTGCTCGGGCTGAGAAGTCATGGAAATTAATTGCAAGTTCCCTGCAATTCATATTGGGTTGTAACATTGAGCTCAGGATCAATTATGTACCATGTACTTCAGATTCAAAGTTTGCAAAATTCAAGAGGTCATCTTTCAATTTCTTTAATTGCTCCCGCAGAATTCTACGGAAATCATTATCATCTCATGAACACGAAACTGAATCGGATTATGCTGATTGTACCTCTGAAAAGCCTATGATGAAGGATCCGACTTTAACTTGTTCATCCGATTGTGGACCTCGGGTGCCACCACCTGAGTCCTATGGTGGAACTGAGTTTGTAACAACTTTGAGAAGTTCTGAAGGGAATTTGCTGAGCACAGCTCAAGTGGCTCCAAGGATTTCAAGTGCAAGAGTTGATTCTCTCAAGGACGACCGAGGCAACTATGCGCATCAAGTCTCATCGACCTTAGATTTGGATAGTCATTCTAACTGTTTTCCTCAAACCCACTGGCTTCATAGGAAGTCCTGTTCTTCTCATGCATCATAA 2787 0.409 MMDGRRHSVDIPISKTLVALRRVRSLRDPSANCISKLSPLIDNVHWENGSGNGFSLRFLEAPHAHGSDDDGILRTKNADFNGQREQDTTDFELNCGLLKSKLNYYGISGKEGQRDDELRYFNPNLEGISGNKSPSESCCSNHGGRGLDLACIMPPINHLRNEESCYSSTALSSQLGRIEYSKSTRKSLCKNQVKRSEMMGDIASQAGSPCLPVGDALSTRSASPYITEGVDVLDNHDGCGISCCWSKSPRFRESNHYSEKEDLPLMLKHVNEKDHYEHRSMRDIGGGTSPNLETPRSLCMKFKPKSFTDLVGQNVVGRSLLGAISRGRITSFYLFHGPRGTGKTSASRIFAAALNCLSLEEQKPCGLCRECVLIFSGRSKDVKEVDSFGLNRVDKAKSLVKNACIPPVSSRFKVFIIDECQFLQGETWVIILNSLEKFPQHVVFVMITPELDKLPRSAVSRAQRYHFPKIKDADIARRLEKICVEESLDFEQVALDFIAAKSFGSLRDAEMMLDQLSLLGKKITTSLAYELTGVVSDEELLELLDLALSSDTSNTVIKARELMRSRIDPLQLMSQLANLIMDILAGKHEVGGSEISRRFSSRHTSEADLQKLNHAVRILSETEKQLRISKNQTTWFTAALLQLSSVECSSVNANDTKLCLRAASIQDGDLCNTSSTGESLKHASIGQCDDKSYRLGVQEGHRGTPDSIWYSATQICRSSRLKKFLRKQGKLSSLWVNEGHAVAELEFHHHDFVARAEKSWKLIASSLQFILGCNIELRINYVPCTSDSKFAKFKRSSFNFFNCSRRILRKSLSSHEHETESDYADCTSEKPMMKDPTLTCSSDCGPRVPPPESYGGTEFVTTLRSSEGNLLSTAQVAPRISSARVDSLKDDRGNYAHQVSSTLDLDSHSNCFPQTHWLHRKSCSSHAS* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0793 928 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 300 519 IPR027417 -
Lan12g0793 928 Gene3D - 534 648 - -
Lan12g0793 928 CDD AAA 311 461 - -
Lan12g0793 928 Gene3D - 471 533 - -
Lan12g0793 928 Gene3D - 291 468 IPR027417 -
Lan12g0793 928 PANTHER DNA POLYMERASE III SUBUNIT GAMMA/TAU 109 905 - -
Lan12g0793 928 SUPERFAMILY post-AAA+ oligomerization domain-like 540 641 IPR008921 GO:0003677|GO:0006260
Lan12g0793 928 SMART AAA_5 329 489 IPR003593 -
Lan12g0793 928 CDD HLD_clamp_pol_III_gamma_tau 470 533 IPR045085 -
Lan12g0793 928 TIGRFAM dnaX_nterm: DNA polymerase III, subunit gamma and tau 297 643 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Lan12g0793 928 Pfam DNA polymerase III, delta subunit 315 470 - -
Lan12g0793 928 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 109 905 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0793 Lan-Chr12 15121517 15126410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0793 289 582 Core DNA Replication Machinery Family AT1G21690 23.649 1.04e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0793 - - lang:109357850 1280.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0793 12 15121517 15126410 Lan1g1455 1 24572581 24577771 LSH