Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0785 ATGGCCGCAGGGCGAAAAAGTGTTTTGCGGAAAAGAGATTCCTTCGAATTTAGTTCCGGAAAGGGACTTGGTCATCATAACAATGATTCTCACAGCGTGGAAGTTGATGGAACTTACAACAATTACACCACCCATTCTGACAAGAACTTCTTTCATGGTGAAAAAGAGGAGAGAGAAGAAGGTGAGCTCTGTTTTGAACATGGTGAAGGTGATGTTTTCACACCACCGGAGAAGAAGAGAAAGTTTTCACCAATTCTATGGGACCTAGCTGAGAAGGATGTGAAAGTCTCTTCCAAAATTCGGGTTACACAGGATGCTCCTGTGTCTCCCATCCCTCAAAATCTACCAAACAGTCCTACAGCTGGTGATGTTTTGCAAGAGGGTGTTTCTGAGGTGTCTCCACCAAATTCATCACATGTGCCACCTCAAAAATATTGTGGGAACGATGAGGAAGATGGGGGGGATGAAGAAAACAAAGTGAAGGGATGGAACATCACAATGTCAAGATGGGCTTCTGATGGACTTTCTCCAAGGGGTGCTGATGACAAATCCAAAGGTCTCAAAGTGATTTCAAGTCCTGAAATTGGTGAATTCCAAACGGAACTATCAGAAAGCACAATCACTAGATCATCAGGAACCGGTGGAAGAGATCAATATCTGAGCCGTTCTGCTTATGATACTGATTCTGAAAAGGAGTTCCCTACTGACTCCAGAGATGATGCTGGAGAACCAAGTGATTTTAGTGATTCTCCATCTGATTCTGATGAAGACAGTGGTTTAGTACATGTGCAGACAAATAGAAACATGTTTCAGAGCAGCAGAAGTATATGTGAGTATGAAATGATTAAGAAAATAAATGAGGGTACTTATGGTGTTGTCTATAAGGCTAGGGATAAGAAAACCGGAGAAGTAGTGGCAATAAAGAAGGTGAAGATGAACATAAGTAGGGATGGCTTTCCATTGTCTGCCTTGAGGGAAATGAACATTCTCTTGTCTTTTGATCATCCTTCCATTGTTGATGTTAAAGAAGTAGCTGTGGATGATTATGATGGTACGTTTATGGTAATGGAATACATGGAGCATGACCTTAAGGAGCTGATGAAGGTAAAAAAGCACCCCTTTAGTATAGGTGAAATAAAATCCATGATGAAGCAACTTCTTGAAGGTGTCAAGTATATTCATGACAACTGGGTGATCCATAGGGACTTGAAGACATCAAATATTCTGCTGAACAATGAAGGGCACCTTAAAATATGTGACTTCGGTCTGTCCCGGCAGTATGGAAGTCCCCTGAAGCCATATACTCCTGTTGTGGTTACACTATGGTACAGGGCACCTGAACTTCTGTTAGGCGCTAAGGAGTACTCAACAGCAATTGACATGTGGTCAGTGGGTTGCATAATGGCCGAATTAATTTCCAAGGAAGCCCTCTTCGCGGGGAAAACTGAAGTGGAACAACTTGACAAGATTTTCCGGACCCTGGGCTCACCAGATGAGAAAATTTGGCCAGGATTATCCAAATTACCTGCTTCTAAAGGAAAATTTATTAAGCAACCGTATAATATGCTAAAGAGGAAGTTTCGAGCCACATCTTTCATTGGTTTGCCAGTTCTGTCTGAGCTGGGATTTGATTTGTTGGAGAAGCTTCTAACCTACGACCCTGAAAAGAGGATAACCGCAGAAGATGCTCTCCTTCATGATTGGTTTCATGAATCCCCCCTCCCCAAATCTGATTTCAAGCCTATTCTTCCTTCTTGGCGTGGCTAG 1767 0.425 MAAGRKSVLRKRDSFEFSSGKGLGHHNNDSHSVEVDGTYNNYTTHSDKNFFHGEKEEREEGELCFEHGEGDVFTPPEKKRKFSPILWDLAEKDVKVSSKIRVTQDAPVSPIPQNLPNSPTAGDVLQEGVSEVSPPNSSHVPPQKYCGNDEEDGGDEENKVKGWNITMSRWASDGLSPRGADDKSKGLKVISSPEIGEFQTELSESTITRSSGTGGRDQYLSRSAYDTDSEKEFPTDSRDDAGEPSDFSDSPSDSDEDSGLVHVQTNRNMFQSSRSICEYEMIKKINEGTYGVVYKARDKKTGEVVAIKKVKMNISRDGFPLSALREMNILLSFDHPSIVDVKEVAVDDYDGTFMVMEYMEHDLKELMKVKKHPFSIGEIKSMMKQLLEGVKYIHDNWVIHRDLKTSNILLNNEGHLKICDFGLSRQYGSPLKPYTPVVVTLWYRAPELLLGAKEYSTAIDMWSVGCIMAELISKEALFAGKTEVEQLDKIFRTLGSPDEKIWPGLSKLPASKGKFIKQPYNMLKRKFRATSFIGLPVLSELGFDLLEKLLTYDPEKRITAEDALLHDWFHESPLPKSDFKPILPSWRG* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0785 588 Pfam Protein kinase domain 279 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0785 588 MobiDBLite consensus disorder prediction 196 222 - -
Lan12g0785 588 MobiDBLite consensus disorder prediction 145 159 - -
Lan12g0785 588 SMART serkin_6 279 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0785 588 Gene3D Transferase(Phosphotransferase) domain 1 361 580 - -
Lan12g0785 588 CDD STKc_CDC2L1 274 569 IPR045267 GO:0004674|GO:0005524|GO:0006468
Lan12g0785 588 SUPERFAMILY Protein kinase-like (PK-like) 275 574 IPR011009 -
Lan12g0785 588 MobiDBLite consensus disorder prediction 105 143 - -
Lan12g0785 588 PANTHER CYCLIN-DEPENDENT KINASE 193 587 - -
Lan12g0785 588 PANTHER CELL DIVISION PROTEIN KINASE 193 587 - -
Lan12g0785 588 Gene3D Phosphorylase Kinase; domain 1 266 360 - -
Lan12g0785 588 MobiDBLite consensus disorder prediction 105 259 - -
Lan12g0785 588 MobiDBLite consensus disorder prediction 223 245 - -
Lan12g0785 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 398 410 IPR008271 GO:0004672|GO:0006468
Lan12g0785 588 MobiDBLite consensus disorder prediction 17 40 - -
Lan12g0785 588 ProSiteProfiles Protein kinase domain profile. 279 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0785 Lan-Chr12 15058885 15061727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0785 272 575 Core Cell Cycle Gene Families AT5G10270 46.250 1.11e-87 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Lan12g0785 Pkinase 8.9e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0785 K08818 - gmx:100788840 774.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0785 12 15058885 15061727 Lan1g1936 1 34617334 34620494 LSH