Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0776 ATGACCACCACCAGATTCAGCGGCGGCGGTCGTTGCGGGGGAGGAGGAGAGGACCGTGTGCTTGCGACAGCTCAGCAGATCGTCAATAGCCTCAACACTGCTCAAGAGGTTCGCGAAGACATGCTCTTAATCTTCTCCAACTTCGATAACCGTCTTTCCGCAATGTCCGACCTAATCAAAGGCGAAGGTTCCAACAACAACAACGATGACGACCTTCAACGCTTCCAAGCCGCCGAGAAAGTCATCCTCCGCTGGGACGCTTCTCTCTCCGCCGGACCTTCCCGCCACTTCAACTCCCTCTTCGATTCCCCAATCGAAGTCTTTGAGTACTTCACTGCTCTCGACGAAATCATCATCTTCATGGAGCAATTCTCGATCTCTCCACCTCCGTCCGATGGCGGAAGAAGCGAACAAACCATGGCGGAGCGTGCAGAGAACGCGGTCCAGCTCGCTATGTCCAGGCTTGAGGAGGAGTTGCGCCACGTGCTGATTCGCAACACTGTACCTCTCAACGCTGAGAGCCTCCATGGTTCAATGAAGAGGGTTTCGCTCTCTTTCGCTTCACATATTGACGAGAGTTTGGAGAGCTTCGGTGATAACGGTAGTGATCGAGGTTACGATCGGTTTCACTCGCGTGGTTCTAGTTTGGACTATGATGATGCAGTTGTCGATTTGGTGAATCTTGATGCGGTTTTAGGGCTGACAGATATTGTGGATCGAATGGTAAAGTCTGGTTATGAAAGAGAGTGCCTTCAGGTTTATAGCAGTGTTCGCCGGGATGCTTTAGATGAGTGTTTGGTAATTCTTGGTGTTGAGAGGTTGAGCATTGAAGAGGTGCAGAGGATTGAGTGGCAAAGTTTGGATGAGAAGATGAAGAATTGGGTTCAAGCTGTTAAGATTGTTGTTGGTGTGTTGTTGTGTAGTGAGAAGAGATTGTGTGATAGTGTGTTTGGTGATTTGGATGAGATGAAGGACATTTGTTTCTATGAGACTGCTAAAGGATGTGTGATGCAGTTGCTGAATTTTGGTGAGGCTGTTTCAATTTGTAAAAGGTCGCCAGAGAAGCTGTTTAGGATATTGGATATGTATGAGGCTTTGAGGGATGCTTTGCCTGATTTGGAGTCTTTGGTTTCGGATGAGTTTGTGATGGGCGAGGTTAGAGGAGTGCTGATTGGACTTGGTGAGGCCACAAAAGGGACGTTTGCTGAGTTTGAGAATTGTATTAGGAACGAGACTTCCAGAAAACCGGTCATAACTGGGGATGTTCATCCATTGCCTCGTTATGTGATGAATTACCTGAAATTGCTTGTGGATTATGGGGAGCACTTGGACCTGCTCCTAGAAATCAGTGACGAGGATCTTCACCATTTGCAGAATGATTTTGGTGGTGGTGGTTCTCAGTTTGAATCCATGTCCCCCTTAGGATGTCGAGTGCTGTTACTGATGTCTGAGCTTGAGTCTAACCTCGTGGAGAAATCAAAACTCTATGTAGACAACGCGATGCAGCAAGTATTTCTGATGAACAATCTCCATTACCTTGTGAGGAAAGTAAAAGACTCGGATCTTGGGAAGGTATTGGGAGATGATTGGATTCGCAAGCGCCGTGGTCAGATACGCCAATATGCTACGGGCTATCTCAGAGCCTCTTGGAGCAAGGCCTTATTTTGTTTGAAGGATGATGGAATTGGAGGGAGCTCTATTAGTGCAGCAAAGGTGGCTTTGAAGGAGAAGTTCAAGAATTTCAATGCATGTTTTGAAGAAATATACAAGAATCAGACAGCTTGGAAGGTACCAGATGAGCAGCTTCGAGAAGAGCTACGGATATCTATATCACAGAAGGTGATTCCTGCATACCGCTCATTTCATGGGAGGTTTAGTAGTCAGCTAGATGGAAGGCATGCGGGGAGATACATAAGGTATACACCGGACGATTTAGAAAACTATTTACTGGATTTATTTGAAGGAAACCCTGCTGCTGCATTGAATCATGTAAGGAGAAAAAGTACATAG 2010 0.4662 MTTTRFSGGGRCGGGGEDRVLATAQQIVNSLNTAQEVREDMLLIFSNFDNRLSAMSDLIKGEGSNNNNDDDLQRFQAAEKVILRWDASLSAGPSRHFNSLFDSPIEVFEYFTALDEIIIFMEQFSISPPPSDGGRSEQTMAERAENAVQLAMSRLEEELRHVLIRNTVPLNAESLHGSMKRVSLSFASHIDESLESFGDNGSDRGYDRFHSRGSSLDYDDAVVDLVNLDAVLGLTDIVDRMVKSGYERECLQVYSSVRRDALDECLVILGVERLSIEEVQRIEWQSLDEKMKNWVQAVKIVVGVLLCSEKRLCDSVFGDLDEMKDICFYETAKGCVMQLLNFGEAVSICKRSPEKLFRILDMYEALRDALPDLESLVSDEFVMGEVRGVLIGLGEATKGTFAEFENCIRNETSRKPVITGDVHPLPRYVMNYLKLLVDYGEHLDLLLEISDEDLHHLQNDFGGGGSQFESMSPLGCRVLLLMSELESNLVEKSKLYVDNAMQQVFLMNNLHYLVRKVKDSDLGKVLGDDWIRKRRGQIRQYATGYLRASWSKALFCLKDDGIGGSSISAAKVALKEKFKNFNACFEEIYKNQTAWKVPDEQLREELRISISQKVIPAYRSFHGRFSSQLDGRHAGRYIRYTPDDLENYLLDLFEGNPAAALNHVRRKST* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0776 669 SUPERFAMILY Cullin repeat-like 75 654 IPR016159 -
Lan12g0776 669 Pfam Exo70 exocyst complex subunit 292 650 IPR046364 GO:0000145|GO:0005546|GO:0006887
Lan12g0776 669 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 62 665 - -
Lan12g0776 669 PANTHER EXOCYST COMPLEX PROTEIN EXO70 62 665 IPR004140 GO:0000145|GO:0006887
Lan12g0776 669 Gene3D Exocyst complex component Exo70 102 661 - -
Lan12g0776 669 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0776 Lan-Chr12 15004774 15007082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0776 18 668 EXO70 exocyst subunit family AT5G50380 57.353 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0776 K07195 - gmx:100818693 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0776 12 15004774 15007082 Lan1g1469 1 24690465 24692826 LSH
Lan12g0776 12 15004774 15007082 Lan1g1927 1 34539916 34544259 LSH
Lan15g0467 15 10904201 10908801 Lan12g0776 12 15004774 15007082 PCT