Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0772 ATGTCTTCATCTATTTATCATGTCTTATTATCGCTTCTTCTTTGCTTTGTGCTACAGGAACCAACCCTAGCAATAAAAAAGCCCTATATTGTATATTTAGGATCACATTCTTTTGGCCAAAATCCTTCCCAACAAGATGTTGAATCTGTTACCGACTTTCACTATGATTTACTTGGATCATTTGTTGGAAGCACCCAAAACGCCAAAGATGCAATCTTTTACTCTTATAATAGGCATATAAATGGCTTTGCTGCACTACTTGATGAAGATGAAGCAGCTATGGTTGCAAAGCATCCGAGTGTAGTATCTGTTTTTGAAAGCAAAAGACGAAAATTGCGCACAACCCACTCATGGGATTTTCTTGGAATACATAAAAATGGTGTAATTTCACATGACTCAATATGGAAGAAGACATTGGGTGAAGATGTCATTATTGCAAATTTGGACAGTGGTGTTTGGCCTGAATCAAAGAGTTTTAGTGATGAAGGGATTGGACCTGTCCCCATAAAGTGGCGTGGAAGCTGTGACAGTGAAAATTTTCACTGCAATAGGAAGCTTATTGGAGCAAAACGTTTTTACAAAGGATACCAAGCACGTCATAAAAATGCTATATTTAATACTGCACGTGACGATAGTGGTCATGGTTCACATACTTTATCAACTGCGGGTGGTAATTTCGTTGATGGAGCAAGTGTATTTGGGAATGGCAATGGAACTGCACATGGTGGTGCACCGAAATCCCATGTTGCGACCTATAAGGTGTGTTGGGCACAAAATAGTTATTGTTATGATGAAGACATTTTAGCTGCTTTTGATGCTGCCATAAGTGATGGAGTTGATGTGATTTCGGCATCATTGAGTGGAGAAAACACCGAATTTTTTCAAAGTGGTGTCTCCATAGGGTCATTTCATGCTGTTGCAAATGGCATAATTGTAGTGAGTGCCGCAGGAAATGAAGGACCAAATCCTACAACAGTTTCGAATGTGGAACCATGGACGTTCACAGTTGCTGCTAGCACAATTGATAGAGAGTTCGCTAATTATGTTAAGCTTGGTAACAACAAAGTCCTCAAGGGATTAAGTCTTTCTGAGTTTGGCTTACCATCTGATAAATTATACCCGTTGGTCAATGCTGAAAATGCTAAAGCTCATAACGCAAATGCTACAGATGCCCTTTATTGCAAAAATGGAACTCTTGATCATAACAAAGGCAATGGAAAAATATTGGTCTGTCATAGATATGATGGTGAACCAATCAGCCAAGGCGTGGAAGTTGCTCGTGTAGGAGGTGTTGGGATGATTTTGATTAACGATGATTCATCGTTTGATGTTTTTTCTGACACTCATGTGCTTCCTGCTACATATGTTAACTTTACGAATGGCAGATACATTTTAACTTACATCAACCACACTAAGTCTCCTTTGGCTCACATCTCTAGAGTGAACACAAATTTAGGTATAAGACCAGATCCAATAATAGCTTCATTTTCATCTAGAGGGCCCAGCAGCATTGACCCAACAATCCTCAAGCCTGATATCACTGCACCTGGAGTTGACATCATTGCTGCTTATTCGGAAGCCGTACCTCCAGGACCACATGATAAGCGCAGAACTCCGTTTATGACTATGTTTGGTACATCAATGGCTACTCCTCATGTTGCTGGCCTTGCTGGGTTGCTCAAAGCAATTCATCCTGATTGGAGTCCAGCAGCTATTAAATCAGCAATCATGACCACAGCTAGAATAAAAGATAACAGCGGGGAGCCAGTTTTGGATGAATGGTTGTTAGATAGGGCAACTCCATTAGCCTATGGTGCAGGGGTCATTCAACCTAATCATGCAGCAGACCCTGGACTTGTATATGACATAAGAACTACTGATTATTTGAACTTCTTGTGTGGCCGTCATTACAACAGTTCTATGATTCAGTTGTTCTATGGGAAGTCTTACACGTGTCCTGAGTCATTCAATATAGCTGATTTCAATTACCCATCAATCTCAATTAATCACTTAGTGCATGGGTATTCTCAAAATGTTAGTCGTACTCTTACTAATGTTGGTTCTCCGGCGAAATATAGAGTACACATCAATGCACCTCGAGAAGTTATTGTTTCAGTTAAACCTAAAATCCTGAGATTTAAGCATAAGGGTGAAAAAAGAAAATTCACAGTTACATTTACATTGAGGCCACTTAAAAAGTCCAAGGCTGATTATTTCTATGGGAGCTTGGTCTGGACTAATCACAAGCACATTGTCAGAAGTCCTATAGTAGTTAAGAATCCAATTCTATAA 2292 0.397 MSSSIYHVLLSLLLCFVLQEPTLAIKKPYIVYLGSHSFGQNPSQQDVESVTDFHYDLLGSFVGSTQNAKDAIFYSYNRHINGFAALLDEDEAAMVAKHPSVVSVFESKRRKLRTTHSWDFLGIHKNGVISHDSIWKKTLGEDVIIANLDSGVWPESKSFSDEGIGPVPIKWRGSCDSENFHCNRKLIGAKRFYKGYQARHKNAIFNTARDDSGHGSHTLSTAGGNFVDGASVFGNGNGTAHGGAPKSHVATYKVCWAQNSYCYDEDILAAFDAAISDGVDVISASLSGENTEFFQSGVSIGSFHAVANGIIVVSAAGNEGPNPTTVSNVEPWTFTVAASTIDREFANYVKLGNNKVLKGLSLSEFGLPSDKLYPLVNAENAKAHNANATDALYCKNGTLDHNKGNGKILVCHRYDGEPISQGVEVARVGGVGMILINDDSSFDVFSDTHVLPATYVNFTNGRYILTYINHTKSPLAHISRVNTNLGIRPDPIIASFSSRGPSSIDPTILKPDITAPGVDIIAAYSEAVPPGPHDKRRTPFMTMFGTSMATPHVAGLAGLLKAIHPDWSPAAIKSAIMTTARIKDNSGEPVLDEWLLDRATPLAYGAGVIQPNHAADPGLVYDIRTTDYLNFLCGRHYNSSMIQLFYGKSYTCPESFNIADFNYPSISINHLVHGYSQNVSRTLTNVGSPAKYRVHINAPREVIVSVKPKILRFKHKGEKRKFTVTFTLRPLKKSKADYFYGSLVWTNHKHIVRSPIVVKNPIL* 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0772 763 CDD PA_subtilisin_like 348 478 - -
Lan12g0772 763 Gene3D - 342 485 - -
Lan12g0772 763 ProSiteProfiles Serine proteases, subtilase domain profile. 117 615 - -
Lan12g0772 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 113 IPR037045 -
Lan12g0772 763 PANTHER PEPTIDASE S8 14 760 - -
Lan12g0772 763 Pfam Fibronectin type-III domain 660 758 IPR041469 -
Lan12g0772 763 Pfam Subtilase family 140 592 IPR000209 GO:0006508|GO:0008236
Lan12g0772 763 CDD Peptidases_S8_3 111 580 IPR034197 -
Lan12g0772 763 SUPERFAMILY Subtilisin-like 113 619 IPR036852 GO:0004252|GO:0006508
Lan12g0772 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Lan12g0772 763 Gene3D Peptidase S8/S53 domain 142 628 IPR036852 GO:0004252|GO:0006508
Lan12g0772 763 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 14 760 - -
Lan12g0772 763 Pfam Peptidase inhibitor I9 29 112 IPR010259 -
Lan12g0772 763 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Lan12g0772 763 PRINTS Subtilisin serine protease family (S8) signature 210 223 IPR015500 -
Lan12g0772 763 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Lan12g0772 763 Gene3D - 632 761 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0772 Lan-Chr12 14972983 14980400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0772 21 759 Subtilisin-like Serine Gene Family AT5G59810 54.339 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0772 - - vun:114175516 917.146