Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0750 ATGGAGATGCTGAGTTTTGTGAAAAATGGAATAAGAAGGTTACCTCTTGGTTTTCGTTTCCAACCAACAGATGAAGAGCTTGTATTTCAGTACTTGAAATGTAAAGTCTTCTCATACCCTTTACCTGCTTCTATTATTCCTGAGATTAATGTCTGCAAGTATGATCCTTGGGATTTTCCAGGAAACTGGGAGCAGGAAGAGATGTACTTTTTCAGCTCAAAGGAAGCTAAGTATCGAAGTGGTAAACGCATGAACCGAACAACCATATCTGGTTATTGGAAGGCAACAGGATCAGACAAGAGAATTTTATCTTCAACTTCATCGTGTGATAGTATTGTTGGGATAAGAAAAAATCATGTTTTTTATCAAGGCAAATCTCCAAATGGCTCTAGAACTGATTGGGTCATGCATGAATATCGCCTTGTTACTATACAAAACAACTACGTAAGTGAGATAGGAGATTGGGTTCTTTGTCGCCTATTGATAAAGAAAAGAAGTGTGATAGAAAGTGATGGTAGCAGTAATCATGTGCATAAAAGAAACACAGTTCAGGGTCTTCCAAGGTTGTTTGATTTTATCATAGTAAGCAAGAAGAGTAGACATTCTTATGCATCCTCATCGTGTTCCAGTTCCAGCGATAACTTAGAAGTATCTTCAAATGCATTAGACCATGAAGAAACAAGTGGCTGA 690 0.3768 MEMLSFVKNGIRRLPLGFRFQPTDEELVFQYLKCKVFSYPLPASIIPEINVCKYDPWDFPGNWEQEEMYFFSSKEAKYRSGKRMNRTTISGYWKATGSDKRILSSTSSCDSIVGIRKNHVFYQGKSPNGSRTDWVMHEYRLVTIQNNYVSEIGDWVLCRLLIKKRSVIESDGSSNHVHKRNTVQGLPRLFDFIIVSKKSRHSYASSSCSSSSDNLEVSSNALDHEETSG* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0750 229 ProSiteProfiles NAC domain profile. 14 163 IPR003441 GO:0003677|GO:0006355
Lan12g0750 229 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 228 - -
Lan12g0750 229 Gene3D NAC domain 23 168 IPR036093 GO:0003677|GO:0006355
Lan12g0750 229 SUPERFAMILY NAC domain 10 163 IPR036093 GO:0003677|GO:0006355
Lan12g0750 229 MobiDBLite consensus disorder prediction 205 229 - -
Lan12g0750 229 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 228 - -
Lan12g0750 229 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0750 Lan-Chr12 14731553 14733063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0750 1 166 NAC Transcription Factor Family AT5G13180 61.446 1.05e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan12g0750 NAM 3.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0750 - - gmx:100812015 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0750 12 14731553 14733063 Lan1g1912 1 34333937 34335813 LSH
Lan12g0750 12 14731553 14733063 Lan1g1488 1 25024806 25026806 LSH