Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0742 ATGATGTCTAGAGTTTCATGGATGGTAGAAGCTGATAGAGAACAACACTCCAATGGCAACAACAACAACAAGGATGAATTATTGAGTTCTTTGGGTGGTTTTAAACCCATGTTTGAGGTCAATGAAGAATGGTTCATGGCAAATAATATTAACCAAAATCACACAGTGTGTTCTCCTAACTATACAGACCCAGATAATCTATTGTTTCATCCATTAGACTCCTCTTCATGCTCACTCTCTTCTTCTATTCTCACCAATCTCAACTCATCTCAGGTGCAATACTTTCTACCTCCAAAACCTACCTTTTCTTCTCTTCTCAATACCAACCCTTTGGAGCATGGCTTTGATCAAAGTGGTACTTATGAGGTGGGGTTTCTTGAGCCTCAAGCTTCCAATTCCAACAACACCTCAAATAATCAATTAAGTACCCTTCCAAGTTATTTGAGCTTAGAACCTCATTTAGAAAATATGTGTATGAATATCATACCCCAAATGCCACAAAGCAGTGTGGACTTTGGTGGTTTTCACACCTTTGAGGAGAGTCCTAGAGAGGCTTTGGTTTTGAACAGATCTAACACACTGAGAGCCCTTAAAACTTTGCCTCAACCTGGTGCAACACAACCAACTCTTTTTCAGAAGAGAGCAGCACTTTGGAATAAAAACTTGACAGATAAGAACATCAACAACTTGGAAAACTGTGAGGTACTTGAGGAAGTGAATTATGATAAGAAAAGAAAGATGAGTAATAGAGGAGAAGATGATGCTGAAGGTGGCAGTTTTGATGGGTCAGGAAGATTGAGTTATGATTCTGATTATGATGTAACTGAGAGTAATAACAATAAGATAGAAGAGAATGGAAAGAATGGTGGAAATAGCTCAAATGCTAACAGCAACATCAGTGGCTTGGATCAGAAAGGGAAGAAGAAAAATGGAATGCCCGCTAAGAATTTGATGGCTGAACGCCGCAGAAGGAAGAAACTCAATGATAGACTCTATATGCTAAGGTCCCTTGTTCCAAACATTAGCAAAATGGATAGGTCTTCAATCCTTGGGGATGCAATTGAGTATTTAAAGGAACTTCTGAAAAAGATCAATGACCTTCATAATGAATTGGAGTCAACACCTTCAGGATCTTCACTCACAACTGCTTCAACTTTCTCTCCTTTGTCACCAACTCTACCTACACTTCGTAGCCGTATGAAAGAACAGCTTTGCCCCACCACTTTGCTTAGCCCAAACGGCCAACCTGCAAGGGTTGAGGTTCGGCTATGTGAAGGAAGAGTCGTAAATATTCACATGTTTTGTGGCCGTAAACCTGGTTTGTTGCTCTCAACTATGAGGACTTTGGATAATCTTGGGTTAGACATTCAACAAGGTGTGATAAGCTATTTCAATGGATTTGCTATGGATATTTTTCGAGCTGAGCAATGCAAGGAAGGTCTGGATATTCATCCAGAGCAAATCAAAACAGCACTCCTGGATTCAGCTGGCTTCCTTAACATCACATAG 1509 0.4003 MMSRVSWMVEADREQHSNGNNNNKDELLSSLGGFKPMFEVNEEWFMANNINQNHTVCSPNYTDPDNLLFHPLDSSSCSLSSSILTNLNSSQVQYFLPPKPTFSSLLNTNPLEHGFDQSGTYEVGFLEPQASNSNNTSNNQLSTLPSYLSLEPHLENMCMNIIPQMPQSSVDFGGFHTFEESPREALVLNRSNTLRALKTLPQPGATQPTLFQKRAALWNKNLTDKNINNLENCEVLEEVNYDKKRKMSNRGEDDAEGGSFDGSGRLSYDSDYDVTESNNNKIEENGKNGGNSSNANSNISGLDQKGKKKNGMPAKNLMAERRRRKKLNDRLYMLRSLVPNISKMDRSSILGDAIEYLKELLKKINDLHNELESTPSGSSLTTASTFSPLSPTLPTLRSRMKEQLCPTTLLSPNGQPARVEVRLCEGRVVNIHMFCGRKPGLLLSTMRTLDNLGLDIQQGVISYFNGFAMDIFRAEQCKEGLDIHPEQIKTALLDSAGFLNIT* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0742 502 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 311 360 IPR011598 GO:0046983
Lan12g0742 502 MobiDBLite consensus disorder prediction 270 304 - -
Lan12g0742 502 Gene3D - 303 375 IPR036638 GO:0046983
Lan12g0742 502 MobiDBLite consensus disorder prediction 1 25 - -
Lan12g0742 502 Pfam Helix-loop-helix DNA-binding domain 318 360 IPR011598 GO:0046983
Lan12g0742 502 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 74 500 - -
Lan12g0742 502 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 314 377 IPR036638 GO:0046983
Lan12g0742 502 MobiDBLite consensus disorder prediction 245 317 - -
Lan12g0742 502 Coils Coil 354 374 - -
Lan12g0742 502 PANTHER BHLH TRANSCRIPTIONAL FACTOR 74 500 - -
Lan12g0742 502 SMART finulus 317 366 IPR011598 GO:0046983
Lan12g0742 502 CDD ACT_UUR-ACR-like 428 472 - -
Lan12g0742 502 CDD bHLH_AtAMS_like 314 385 - -
Lan12g0742 502 MobiDBLite consensus disorder prediction 245 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0742 Lan-Chr12 14660443 14663675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0742 34 475 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 45.532 1.59e-96 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan12g0742 HLH 1.4e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0742 - - lang:109358267 745.732