Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0738 ATGGCATCAAATACTGAGAAAAATAGTGAGTCTTCTGATTCTCCAATAGCAACACCAGTTGCAAAACAACCAACACTAGAAGTTGTTGAAACCAAAAGTGAAAGAATCAAAGCCACTAGACACCCCAGATGGACAAGACAAGAAACACTTGTTCTCATTGAGGCCAAGAAAATGGTGGAAAATGGAGAGCAACTTTTCCGTTTCAAATCATCTTATGGCCTTCTTAATAACAGTGATCCAAAATGGGAGATAGTGTCATCATGCTGCCAACAACAAGGTGTGAAGAGAGGATCTGTCCAGTGCAGGAAAAGATGGGGAAATCTTCTCACCGATTTTCGGAAGATCAAGAAATGGGAATCAAGTGTAAAGGATGAGGGTGAATCTTTTTGGATGATGAGGAATGATAAAAGGAAAGAAAACAAGTTGCCAGGGTTTTTTGATGAAGTTGTATATAGGGTTTTAGATGGTGGGGTATTAAGTGCTGTTGCATTGCCTTTAACGTTGATTAAGATGCCATCTAAACCTGAGAATGGTGTTGGTCATGTTGAAGGAATGGCTTTAGAGCATGATGATAATGATGACGACGACGATGACAATGAGGAAGATGAGGCCATTGTTGATAGTGATAAGATGAGTTGGAGCACAGAAGAGAACATATTTGATACAAATACTGCACGCAGTAAGTTATTCAGTCCAATAAAAACATCAGCTTCTAAGGGAACATTTTTGAGAGGGAGTCTCAAAATAACACCCACACTTGCATTGCCAACTACTGAGAAACAGCAACATCCATCTTGCCAAGGGAACTACTATCCTGGCTGCCATAGAGAACCTATGTTCCAAGAAGGACACAAGAGAAAGCGATCATCACCAGATAATAGTGAAGACGCCACAGATTTCAGCAATAATATTATCAAGGTGCTAAGGAGGAATACTAACATAATGAAAGCCTATCTTGGAGCTCAGAACATTAATCAGCAATTGGCCAGGGACCAGCAGAAAGAGCAATCAGATAACTTAGTTGCAGCACTTGGCAAGCTCACAGATGCTATGACAAAAATTGCTGACAAGCTGTAA 1077 0.403 MASNTEKNSESSDSPIATPVAKQPTLEVVETKSERIKATRHPRWTRQETLVLIEAKKMVENGEQLFRFKSSYGLLNNSDPKWEIVSSCCQQQGVKRGSVQCRKRWGNLLTDFRKIKKWESSVKDEGESFWMMRNDKRKENKLPGFFDEVVYRVLDGGVLSAVALPLTLIKMPSKPENGVGHVEGMALEHDDNDDDDDDNEEDEAIVDSDKMSWSTEENIFDTNTARSKLFSPIKTSASKGTFLRGSLKITPTLALPTTEKQQHPSCQGNYYPGCHREPMFQEGHKRKRSSPDNSEDATDFSNNIIKVLRRNTNIMKAYLGAQNINQQLARDQQKEQSDNLVAALGKLTDAMTKIADKL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0738 358 MobiDBLite consensus disorder prediction 1 19 - -
Lan12g0738 358 Gene3D - 44 114 - -
Lan12g0738 358 MobiDBLite consensus disorder prediction 189 205 - -
Lan12g0738 358 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 27 358 - -
Lan12g0738 358 MobiDBLite consensus disorder prediction 186 207 - -
Lan12g0738 358 Pfam Myb/SANT-like DNA-binding domain 42 126 IPR044822 -
Lan12g0738 358 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 27 358 - -
Lan12g0738 358 ProSiteProfiles Myb-like domain profile. 43 109 IPR001005 -
Lan12g0738 358 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0738 Lan-Chr12 14621902 14624134 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan12g0738 Myb_DNA-bind_4 8.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0738 - - lang:109338322 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0738 12 14621902 14624134 Lan1g1903 1 34233110 34236815 LSH
Lan12g0738 12 14621902 14624134 Lan1g1503 1 25384519 25386306 LSH