Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0720 ATGCCGCAAGATTCCTCAGAACAAGACCTTGATGATTCCGAATTCGTTGAAATTGATCCCACCGCTAGATACGGCCGGTATAAGGAAGTGTTGGGGAAAGGAGCTTTCAAGAAAGTATATCGCGCTTTCGATGAGTTGGAAGGGATTGAAGTGGCTTGGAATCAGGTTAAGGTGGCGGATCTATTGCGTAACTCTGTAGATTTGGAGCGCCTCTATTCAGAAGTTCATTTGCTCAAGACATTGAAGCATAAAAATATAATTAAATTTTACAATTCATGGGTTGACACTAAGAATGAAAACATCAATTTCATAACTGAAATTTTCACCTCAGGAACATTGCGCCAATACCGGCAGAAACATAAGCACGTTGATTTGAGAGCTTTGAAAAAATGGTCTAGGCAGATATTGGAGGGCCTTTTCTATCTTCATAGTCATAATCCACCAGTTATTCATCGAGACCTTAAGTGTGACAACATTTTTGTCAATGGGAATCAAGGGGAGGTGAAAATTGGTGATTTAGGACTGGCAGCTATTCTTCAAAAGGCCAATTCAGCTCACAGTGTTATAGGTACCCCAGAGTTCATGGCCCCAGAACTTTACGAAGAGGAATATAACGAGCTTGTTGACATCTATGCTTTTGGCATGTGCTTGCTGGAGTTGGTGACTGTCGAGTACCCATATGTCGAATGTACCAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAGTAAAGCCAGCATCGTTGGGAAAAGTGACAGATGTTGAAGTTAAAGCATTTATAGAAAAGTGTATCGCTAATGTTTCTGAACGTTTGCCTGCAAAAGATCTCTTGATGGATCCCTTCCTTCAGTCAGATTTTAATAGTGAAAGTGTAGGTCGTTCTTCTAGGTCTGAAATCCATCATTCAGGAAATAGTCATGACAACCAAGCCATTGGAAAAAGTGTTGTAGAGATTTCTGGTGAGACAAGCAGGGAATTCACAGTGGAAGGTCAAAGGAGAGATATTAATACAATATTCTTAAAACTGCGAATAGTAGACTCCTCAGGTAATATTCGCAATATCCACTTCCCTTTTGATGTTGCAGCAGACACTTCAATCTCCGTTGCTAGTGAAATGGTTGAAGAATTGGAGCTTACTGATCAAGATGTTACGACTATTGCTGAGATGATTGACTCAGAAATTCGACATCATATTCCTGATTGGAATCCAAGTGAAAATCATGTCAATTGTTTTTGCCAAGATTCAACAATTTCAAGTGACGGTACACCTGAAACTTGTCATGAGGCTTCTCCTGTTGTTTATGATTCTATCATCTCTCCTGGTACTCTTGCATTAGAAACATTACCTTCAGGTCGCAAGTACTGGTCAGACTCACCCAAGGCATTTGGTGGAAATTCTCCATGTAGGCATGGTGCTGCGAATTTGTCTTATGAGGTGGATGCAACTGCTGAGGAATGCAGCTTCAATGAAAATGGTGCTATTTCAGTTGAGTTAGATCCTCGTGACGAGATCTGTGTTGGTGATTATAGTACAGAGAAGGAATATGATGGGACTGTTGATTCCACTTTCAGTGAAAGAAGTATTACATCTGGGTATTTAGATGCAACCGGTGAAAAAATTTCTCTGGAAGAAATGTCTGGAATTTCGAAAGATTCTGATATAGAAGACATCACTAAAATAGCCATAAAATTGGAGAGTTTGTTGGTAAGACAGAGAGAGGAGTTACATGAACTAAAGACGAAGCACAAATTAGCTATCTCAGATCTTTTGAAGGGAATTTCTCCACAAATGTGCCAAAAGGTTCTAAATATATGCAACCTACGAATGCCTGACTATGGAAATGTAGGGATAGGGTAA 1860 0.3989 MPQDSSEQDLDDSEFVEIDPTARYGRYKEVLGKGAFKKVYRAFDELEGIEVAWNQVKVADLLRNSVDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRQKHKHVDLRALKKWSRQILEGLFYLHSHNPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQKANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYVECTNAAQIYKKVTSGVKPASLGKVTDVEVKAFIEKCIANVSERLPAKDLLMDPFLQSDFNSESVGRSSRSEIHHSGNSHDNQAIGKSVVEISGETSREFTVEGQRRDINTIFLKLRIVDSSGNIRNIHFPFDVAADTSISVASEMVEELELTDQDVTTIAEMIDSEIRHHIPDWNPSENHVNCFCQDSTISSDGTPETCHEASPVVYDSIISPGTLALETLPSGRKYWSDSPKAFGGNSPCRHGAANLSYEVDATAEECSFNENGAISVELDPRDEICVGDYSTEKEYDGTVDSTFSERSITSGYLDATGEKISLEEMSGISKDSDIEDITKIAIKLESLLVRQREELHELKTKHKLAISDLLKGISPQMCQKVLNICNLRMPDYGNVGIG* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0720 619 Coils Coil 562 582 - -
Lan12g0720 619 Gene3D Transferase(Phosphotransferase) domain 1 108 290 - -
Lan12g0720 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Lan12g0720 619 ProSiteProfiles Protein kinase domain profile. 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0720 619 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 341 395 IPR024678 GO:0004674|GO:0005524
Lan12g0720 619 Gene3D Phosphorylase Kinase; domain 1 9 106 - -
Lan12g0720 619 Pfam Protein kinase domain 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0720 619 SUPERFAMILY Protein kinase-like (PK-like) 28 284 IPR011009 -
Lan12g0720 619 Gene3D - 337 427 - -
Lan12g0720 619 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 6 610 - -
Lan12g0720 619 SMART serkin_6 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0720 619 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 6 610 - -
Lan12g0720 619 CDD STKc_WNK 23 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0720 Lan-Chr12 14107430 14111279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0720 11 402 MAP Kinase Kinase Kinase AT3G22420 55.329 4.28e-164 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lan12g0720 Pkinase 5.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0720 K08867 - gmx:100272204 829.706