Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0708 ATGAAAAGCCTCTCTCTTGGGCCGTTCCTTGTTGCCAGTGCCCCAGTTGGTAGCAGAGATTTTGCTATAACAAGACAATGCTTTCCCAAACAACTTCACTTCAACTCCCACAGTGTTGTTTCCTCTTCATACTTATGCTATGCAACACTTTCAGTAGTGCCAGAATTACAAGAAAAAGAAGTATTTGATGGAGAGAAGGCATCTTTGCTGGTTAAAGAGCTTAGAAAGAGTTTTGATTTAGGCAGAACAAAGAGCTATGAATGGAGGGTGTCTCAGTTAGAGGGCATAGCTAAGATGCTAGAAGAGAAGGAGAAGGAAATTGCTGAAGCACTTTATAAGGACCTTTCTAAACCTGCTCTTGAAGCATTTATATCTGAGTTTTCCCAGGTAAAAGGCTCATGTAGTGAAGCACTTCAAGAATTGAAACAGTGGATGAAGCCTGAAAAGGTGAACACTTCAATCACAACATATCCATCATCTGCAGAGATTGTGTCAGAACCACTGGGAGTTGTGCTAGTCATCTCAACATGGAATTTTCCTTTTTTGCTATCAATGGATCCAGTCATTGGAGCTATTTCAGCGGGTAACGCAGTGGTCCTGAAACCATCAGAAATAGCTCCAGCAACTTCATCACTGCTTGCAAATTTGCTCAAAGATTATCTTGACAATTCTGCCATAAGAGTTGTTGAAGGGGCTGTTCATGAAACAACTGCACTCTTGGAGCAAAAGTGGGATAAGATACTTTACACAGGTAGTGCTAGAGTAGGTCGCATTGTCATGGCTGCTGCTGCAAAGCACCTTACACCAGTGGTTCTGGAACTTGGAGGAAAGTGCCCAGCTGTAGTTGATTCAGATATCAACTTACAAGTTGCTGCTAGGAGGATAATAGGTGGCAAATGGGCATGCAATAGTGGACAAGCATGCATTTCTGTTGATTATATCATCACAACGAAAGAGTTTGCTCCAAAGCTGATAAATGCTTTAAAAGAAGAATTGGAGCAATGTTTTGGAAAAGATCCAATTGAGTCAAAAGACATGTCACGTATTGTGTCTCCAGCCCAATTTACTCGGCTCGCGAAGCTCTTGGACGAGGTATCTGACAAAATTGTTTTAGGAGGTCAGAAGGATGAGAAGAAATTAAAGATTGCTCCTACTATTGTATTGGATGTTCCACAAGAAGCTATGGTTATGCAAGAGGAAATATTTGGACCTATAATGCCAATTATCACTGTGGACAACATAAAAGATAGCTTCAGTATAATCAAATCAAAGCCAAAACCTCTTGCTGCATATCTCTTCACAAACAATGAGCAACTGAAGAAGGATTATGTGGAAAATATATCTTCTGGAGGGATGCTCATCAATGACACTGTCCTACATGTTGCGACTCGTGGTTTGCCATTTGGAGGAATTGAAGAGAGTGGAATGGGTTCTTACCATGGCAAATTCTCTTTTGATACCTTTAGCCACAAGAAATCGATCCTTTATAGAGGTTTTGAAGCAGATACATCCTTAAGGTATCCCCCATATACACCTAAGAAGGAGAAATTGTTAAAGGCTATCATCAATGGCAATATTTTTGGAGCAATTCTTATTCTTATAGGATGGTCTTAA 1614 0.404 MKSLSLGPFLVASAPVGSRDFAITRQCFPKQLHFNSHSVVSSSYLCYATLSVVPELQEKEVFDGEKASLLVKELRKSFDLGRTKSYEWRVSQLEGIAKMLEEKEKEIAEALYKDLSKPALEAFISEFSQVKGSCSEALQELKQWMKPEKVNTSITTYPSSAEIVSEPLGVVLVISTWNFPFLLSMDPVIGAISAGNAVVLKPSEIAPATSSLLANLLKDYLDNSAIRVVEGAVHETTALLEQKWDKILYTGSARVGRIVMAAAAKHLTPVVLELGGKCPAVVDSDINLQVAARRIIGGKWACNSGQACISVDYIITTKEFAPKLINALKEELEQCFGKDPIESKDMSRIVSPAQFTRLAKLLDEVSDKIVLGGQKDEKKLKIAPTIVLDVPQEAMVMQEEIFGPIMPIITVDNIKDSFSIIKSKPKPLAAYLFTNNEQLKKDYVENISSGGMLINDTVLHVATRGLPFGGIEESGMGSYHGKFSFDTFSHKKSILYRGFEADTSLRYPPYTPKKEKLLKAIINGNIFGAILILIGWS* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0708 537 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER I1, CHLOROPLASTIC 41 537 - -
Lan12g0708 537 Coils Coil 93 113 - -
Lan12g0708 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 276 474 IPR016163 GO:0016620
Lan12g0708 537 PANTHER ALDEHYDE DEHYDROGENASE 41 537 IPR012394 GO:0006081
Lan12g0708 537 Pfam Aldehyde dehydrogenase family 68 494 IPR015590 GO:0016491
Lan12g0708 537 PIRSF ALDH 53 531 IPR012394 GO:0006081
Lan12g0708 537 SUPERFAMILY ALDH-like 70 510 IPR016161 GO:0016491
Lan12g0708 537 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 75 492 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0708 Lan-Chr12 13870945 13874848 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0708 16 537 Aldehyde Dehydrogenase Gene Family AT4G34240 64.916 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0708 K00128 - gmx:100800699 884.789