Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0693 ATGAAGATACAAGGCTGTGAGGTTGAGGCCATTGGCATCAACTACAAGATCCAAACACAGAAAACTAAGCACCCTTTTAAAGTCTTCAGCAAACCTCCAACAATAGATGCCAAAGAAGATGGTCAAGAACAGGAAGAGGAAGCAAAAGATGAGCAAAGTTGCAGTGGAGTTAAGCATGTCCTCAAGAATGTGAGTTGCAGAGCCAAGGCATGGGAAATCCTAGCAATTGTTGGGCCAAGTGGAGCTGGAAAGTCATCACTGCTTGAAGTTCTTGCTGGTAAAGTTAGTCCACAGAATGGTACTGTCTTGGTGAACCAGAAGCCTATGGACAAAGCTCAGTTAAAGAAGCTTTCAGGGTATGTTACACAAAAGGATATTTTGTTTCCTTTACTTACAGTAGAAGAAACCATGATGTTTAGTGCAATGCTAAAGCTAAAGCTTCCACAAGAGCAATTATGCTCCAGGGTCAAGTCACTGATTAAGGAGCTTGGACTTGACCATGTTGCTGGGACTAGAATTGGTGATGACAGGGTCAGAGGGATATCCGGTGGTGAGAGGCGCAGAGTTTCTATTGGTGTTGAAGTCATACATGATCCAAGAGTGCTGATTCTGGATGAACCAACTTCAGGGCTAGACAGTAACTCAGCTTTGCAGATAGTTGATATGCTTAAGGTCATGGCAGACACTAAGGGAAGAACTATAATCCTTAGTATCCATCAACCTGGGTTCAGAATAGTGAAGTTGTTGAATTCATTGCTATTGTTAGCCAATGGCTGTCTGTTTCACCATGGCACCGCAGATTTGCTGGATGTGAATCTAAGGCTAATGGGTTTAAATATTCCTCTTCATGTTAATGTTGTTGAATTTGCCATTGAGTCCATTGACGCCATTCAGCAACAAAGGTGTAAGCTAGTTCAGCTAGAAACACCGCAAGGGACACTGCAACAGAACAAAGGTGATGATGCAGAAGAAACAGGTGAGTGTAGAAGTGGTAAGTTTACTCTACAACAGCTCTTTCAACTGTCTAAGGTGATTGATGAAGAAACCATCAATGCTGGGATCGATTTCCCTTGTGATTTTGCTAATTCTAGATTTAGAGAAACTATGATTCTCACTCAAAGGTTCTCTAAAAACATATTTCGTACAAAAGAGCTCTTTGCCTGTAGAACAATTCAGATGCTGATTTCTGGGCTGGTTTTGGGGTCCATCTTTTGTAACCTCAAGGATGATCTAGTGGGAGCAGCAGAAATAGTTGGTCTATTTGCTTTCATATTAACATTTTTGTTATCAACCAGCATAGAAGCTCTACCAATCTTTCTGCAAGAAAGGGAGATTCTAATGAAGGAAACATCTTCTGGAAGCTACCGCGTATCATCCTATGCTATTGCCAATGGCCTAGTATACTTGCCATTTCTGCTCATCCTAGCCATTTTGTTCTCATTGCCCTTATACTGGCTAGTTGGTCTCAACAAGAATTTCATGGCGTTTTTGCACTTTTTGTTGCTGATATGGCTGATTCTTTATACAGCCAATTCAGTTGTGGTGTGTTTCAGTGCTTTAGTGCCTAATTTCATTGTCGGGAATTCATTGGTTGCTGGTGTCATCGGTTCATTCTTCTTATTCTCTGGATACTTCATATCAAATCATGAAATTCCTAACTACTGGATTTTCATGCATTATATATCTCTGTTTAAGTATCCCTTTGAAGGGTTGCTCATAAATGAGTTCTCCAACTCAGGGAAGTGCTTGCAGTACATGTTTGGGGAATGCGTACTGAGAGCCGAGAGTGTGCTTAAAGAAGAAGGGTATGGAGGAGAGAACAGAAGATGGAAGAATGTGGGGGTCATGGTGTCCTTCATCTTGTTTTACAGGTTCATTTCTTATGTTTTTCTTAGATACAGATGCTCACAGAGGGGGTTCAAAAGTGTTGGCATCATCTAA 1941 0.4122 MKIQGCEVEAIGINYKIQTQKTKHPFKVFSKPPTIDAKEDGQEQEEEAKDEQSCSGVKHVLKNVSCRAKAWEILAIVGPSGAGKSSLLEVLAGKVSPQNGTVLVNQKPMDKAQLKKLSGYVTQKDILFPLLTVEETMMFSAMLKLKLPQEQLCSRVKSLIKELGLDHVAGTRIGDDRVRGISGGERRRVSIGVEVIHDPRVLILDEPTSGLDSNSALQIVDMLKVMADTKGRTIILSIHQPGFRIVKLLNSLLLLANGCLFHHGTADLLDVNLRLMGLNIPLHVNVVEFAIESIDAIQQQRCKLVQLETPQGTLQQNKGDDAEETGECRSGKFTLQQLFQLSKVIDEETINAGIDFPCDFANSRFRETMILTQRFSKNIFRTKELFACRTIQMLISGLVLGSIFCNLKDDLVGAAEIVGLFAFILTFLLSTSIEALPIFLQEREILMKETSSGSYRVSSYAIANGLVYLPFLLILAILFSLPLYWLVGLNKNFMAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSLVAGVIGSFFLFSGYFISNHEIPNYWIFMHYISLFKYPFEGLLINEFSNSGKCLQYMFGECVLRAESVLKEEGYGGENRRWKNVGVMVSFILFYRFISYVFLRYRCSQRGFKSVGII* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0693 646 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 1 634 - -
Lan12g0693 646 Gene3D - 49 309 IPR027417 -
Lan12g0693 646 Pfam ABC-2 type transporter 368 576 IPR013525 GO:0016020|GO:0140359
Lan12g0693 646 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 267 IPR027417 -
Lan12g0693 646 Pfam ABC transporter 61 209 IPR003439 GO:0005524
Lan12g0693 646 MobiDBLite consensus disorder prediction 28 51 - -
Lan12g0693 646 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 46 282 IPR003439 GO:0005524
Lan12g0693 646 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 1 634 - -
Lan12g0693 646 ProSitePatterns ABC transporters family signature. 181 195 IPR017871 GO:0005524
Lan12g0693 646 SMART AAA_5 70 288 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0693 Lan-Chr12 13742952 13745410 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0693 60 269 Calmodulin-binding Proteins AT2G36910 26.728 1.37e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0693 K05681 - gmx:100789722 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0693 12 13742952 13745410 Lan1g1881 1 34001810 34004243 LSH