Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0689 ATGGCTGGTTGGTGGAGTAGAAACTCGTCTAAGAAGAAGCACAAGGATGATGAAGAAGAAAAAAGTGGTAGTGCTAATTTTAATTGTATGAAATCATCAACCAGAAAAGGTAAGAAGAAGGGAAAGGTTAAGGATAAGGCAAACAACTTTGATGAATTATTGCCTCATGCTCAGAGGGTGTTTCAATACGGATATGCTTCTTCCACCTCTACATCAGGTTCCAGTGCAAGCTCTTCTGCTTCCTTCGATGATCACCCTACTTCACCTCATTTTCATTTTCCCAACAGAGGACTAGGTACTGAAATGAAGTTGAAAGTGAAGTCAAAATGTAATGTTGGGTCAAGAGGACTCACTTCTAACCTTGCTGCTACATCACCCATCCATCCAAGGTTGCATCTTTTCAGTCTTGACTCTGCTCAAGACCATGGACGGAGTCAAAGTCAAGGTCAAGGTCCATGTCATCCTCTGCCTCTTCCACCACCACCACCCTCTCCTCCTCCTTTCAACACACCATCATTAAAAAACATCACTAGTAATCTTTCTAAGTGGCAAAAAGGGAAGCTTCTAGGACGAGGAACATTTGGCCATGTTTATCTAGGATTCAATAGTGAAAGTGGACAAATGTGTGCAATAAAAGAAGTTAAGCTTGTCTTGGATGATCAAACATCAAAAGAGTGCCTAAAACAACTTAACCAGGAGATAAATCTGCTTAATCAGCTCTCACATCCAAACATTGTTCAATACTATGGGAGTGAACTGGGCAAAGAAGTGCTTTCCGTTTATTTGGAATATGTCTCTGGTGGTTCCATTCATAAATTACTGCAGGAATATGGTCCATTTAGTGAGCCTGTTATTCAAATTTATACCAGGCAGATTGTCTCTGGACTTGCCTATCTGCATGCAAGAAATACAGTACACAGGGATATCAAAGGGGCTAACATATTGGTTGATCCTAATGGTGAAATCAAGCTGGCAGACTTCGGAATGGCTAAACATATAAACTCTTCTGCCTCAATGCTTTCTTTCAAAGGAAGTCCACACTGGATGGCACCTGAGGTTGTCATGAATACAAATGGCTACAGTCTGCCCGTTGATATTTGGAGCTTGGGATGCACAGTCCTTGAAATGGCAACAGCGAGGCCTCCATGGAGTCAGTTTGAAGGGGTAGCTGCCATATTTAAAATTGGGAACAGCGAAGATATACCTGAAATCCCGGAGCATCTTTCAAATGATGCAAAGAACTTCATTAAGCTATGCTTACGTAGGAACCCATTAGCTCGCCCGACAGCCCAAAAGTTACTTGACCACCCCTTCATTCGAGATCAATCAGCAACGAAAGCTTCAAATTTTGGCATAACAAGAGATGCTTTCCCCTACATGTTTGATGGAAGCCGGACACCGCAGCCTGTTTCAAAGCCTCATTCGAATCGAACAAGTATGACTTCACATGATAGAGATCTCGCAGCTACACGTGGGTCAAATAACCCCAGAGATAACACAAGAATGATTACATCTTTACCAGTGTCTCCCTCTTCAAGTCCATTGAGACAGTATGGGGCAGCACAAAAAAGCTGTTTCTCTTCTCCCACTCATCCGAATTACACAATGACTCGACAAAGTAATCACCCTTCATCATTTCCAGTGAGATTAAATGCAACATTCACTCTCGATCCTCGGCATGAAACATCTCTATATAGAGCTCAAACACCACCTGGTGGATCTCCAAGAACGAGACTCATTTGA 1743 0.424 MAGWWSRNSSKKKHKDDEEEKSGSANFNCMKSSTRKGKKKGKVKDKANNFDELLPHAQRVFQYGYASSTSTSGSSASSSASFDDHPTSPHFHFPNRGLGTEMKLKVKSKCNVGSRGLTSNLAATSPIHPRLHLFSLDSAQDHGRSQSQGQGPCHPLPLPPPPPSPPPFNTPSLKNITSNLSKWQKGKLLGRGTFGHVYLGFNSESGQMCAIKEVKLVLDDQTSKECLKQLNQEINLLNQLSHPNIVQYYGSELGKEVLSVYLEYVSGGSIHKLLQEYGPFSEPVIQIYTRQIVSGLAYLHARNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSASMLSFKGSPHWMAPEVVMNTNGYSLPVDIWSLGCTVLEMATARPPWSQFEGVAAIFKIGNSEDIPEIPEHLSNDAKNFIKLCLRRNPLARPTAQKLLDHPFIRDQSATKASNFGITRDAFPYMFDGSRTPQPVSKPHSNRTSMTSHDRDLAATRGSNNPRDNTRMITSLPVSPSSSPLRQYGAAQKSCFSSPTHPNYTMTRQSNHPSSFPVRLNATFTLDPRHETSLYRAQTPPGGSPRTRLI* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0689 580 MobiDBLite consensus disorder prediction 153 170 - -
Lan12g0689 580 MobiDBLite consensus disorder prediction 561 580 - -
Lan12g0689 580 Gene3D Transferase(Phosphotransferase) domain 1 180 456 - -
Lan12g0689 580 PANTHER MAP KINASE KINASE KINASE 67 561 - -
Lan12g0689 580 MobiDBLite consensus disorder prediction 140 173 - -
Lan12g0689 580 MobiDBLite consensus disorder prediction 9 24 - -
Lan12g0689 580 MobiDBLite consensus disorder prediction 462 516 - -
Lan12g0689 580 Pfam Protein kinase domain 184 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0689 580 SUPERFAMILY Protein kinase-like (PK-like) 180 527 IPR011009 -
Lan12g0689 580 MobiDBLite consensus disorder prediction 67 85 - -
Lan12g0689 580 MobiDBLite consensus disorder prediction 1 51 - -
Lan12g0689 580 ProSiteProfiles Protein kinase domain profile. 183 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0689 580 CDD STKc_MEKK1_plant 182 439 - -
Lan12g0689 580 ProSitePatterns Protein kinases ATP-binding region signature. 189 212 IPR017441 GO:0005524
Lan12g0689 580 MobiDBLite consensus disorder prediction 67 96 - -
Lan12g0689 580 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 67 561 - -
Lan12g0689 580 MobiDBLite consensus disorder prediction 468 516 - -
Lan12g0689 580 SMART serkin_6 183 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0689 Lan-Chr12 13718236 13723133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0689 95 479 MAP Kinase Kinase Kinase AT1G53570 64.070 3.68e-168 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lan12g0689 Pkinase 1.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0689 K04421 - gmx:100787064 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0689 12 13718236 13723133 Lan14g0461 14 9906959 9913025 PCT
Lan12g0689 12 13718236 13723133 Lan3g0717 3 13004609 13015567 PCT
Lan14g0461 14 9906959 9913025 Lan12g0689 12 13718236 13723133 PCT
Lan3g0717 3 13004609 13015567 Lan12g0689 12 13718236 13723133 PCT