Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0680 ATGAGTACTATGACCGACCCTGAAAGCTCAGAAGAAGGTGCGGAGGTTCCAGAGCCTCCCGATCCAGATGTTCTTGAAACTGATCCTACTTGTCGTTACATTAGGTATAAAGAAGTGGTCGGCAAAGGAGCATTTAAAACTGTTTACAAGGCATTTGATGAAGTCGACGGGATTGAAGTTGCATGGGGCCAGGTTCAAATTGATGAGGTTCTACAGTCACCGGGTGACTTAGAGAGGCTGTACTCAGAAGTTCATCTCTTGAAATCACTGAGGCACAATAACATAGTAAGATTCTACAATTCCTGGATTGATAACAAGCACAAGACTGTTAACATGATTACTGAGTTATTTACCTCGGGTAGCCTCCGACAGTACCGCATAAAACACAAGAAGATAGACATGAAGGTTGTTAAAGGATGGGCAAGACAAATTTTAACGGGTTTAAACTACCTCCACAATCATAACCCACCAATTATACACAGGGACCTGAAATGTGATAATATTTTTATAAATGGTCACCAAGGAGAAGTTAAAATTGGAGATTTGGGACTGGCAACTTTCTTGGAGCAGAGTAATGCCAAGAGTGTAATTGGAACTCCAGAGTTTATGGCACCTGAGTTGTATGATGAAAACTACAATGAATTAGCTGACATATATTCATTTGGTATGTGCATGCTTGAGTTGGTGACTTCTGAGTATCCTTATAGCGAATGCAAAAACTCAGCTCAAATATACAAGAAAGTGTCATCTGGCATAATGCCTGCTGCCCTTTCTAAAATCAAAGATCCAGAAATAAAATCATTTATCGATAAATGTCTTGTCCCAGCATCTCGAAGATTGTCAGCAAAGCAGCTTTTGATGGACTCCTTTCTTCAAGTGACTAATTTGGCAAAGAATCAATCTTTTCCATTGTCGAACATTGTTATTCCGAATATGGTAGCTTCTGAAAACCAGTGTCTACTGTCAGAAGGTGGTGTTAGTGCACGTAATGGAGCCACTTCTATGGATCTTGATGACACACCACCGGTAATCACTGTATTTGATAATTCTTCTAATGGTGCATCAACCTTCTCATGTGTTGAGATAAGAAGGTTGAAGGGAGATTATATATTCTTTTTAAAAGGCGAAGAAAATGATGAAAGTTCCGTATCATTAGTCCTCCGGATAGCTGATCAGAGTGGACGGGCAAGAAATATCGATTTCACGTTCTACCTTAACAGTGACACAGCTGTCTCAGTTTCAAATGAAATGGTTGAACACCTTGAACTTGCTGATCAGAATGTTAAGTTTATCGCTGAGTTAATAGATTTGTTGTTGATAAATTTGATTCCTACTTGGAAACCTTGTGTAGTGATTGATCATTTGATTTCGCCATGTGGTAAAGGGACTCGTGCAAAGCAACCAGCAGACTCAGAGTTAGCAAAATATAGCGAAAGCTCAGAATACACTGGTCAAGTTATGACGGAAGACATAGGTCCCTCGAATTTGCCTGTATTGTCAATTGAAAAAGAAGACCCATATACTGTAGATCTTGATGATGTTTTATCTCATCGGAACACCGATCTTGGAATAGCAACCAAGACAAGTGAATCACAGATGTCATATGCTTCTGCAATATCTGACTTCGAGAGTGATAAGTTGTCTGTAGTCTCATTCATTTCTGCTGAATCGGGAGTATCACCCTTAAGCTTAGTTAGAGGGAGTCAATCCTCATTTGCATCTGAAATTGCAGCTTCACCAAGGAGCAAGTTATTAGACATGGGAAGTAATGGTATGATGAGTGTTTCCTCTTCCTTCGACAGTGATAAGTTGTCCATAGTCTCATTCATTTCTTCTGAATCAGGAGTATCACCCTTAAGCTTAGTTAGAGGGATTCAATCCTCATTTGCATCAGAAATCGTGGCTTCACCTAGGAGCAAGTTATTAGACATGGGAAGTAATGGTATGATGAGTGTTTCCTCTTCCTTCGAACTTGATGATGACTTGAAAATAGAGTTAGAAAAAATCGAACAGAAGTATCAAGAGGCAATCAAAGATTTATGCAAGAGAAGAGACGAGGCCATCATGGAAACTAGAAGGAGAATGTCAGAGAAGATGCAATTGTAG 2106 0.3965 MSTMTDPESSEEGAEVPEPPDPDVLETDPTCRYIRYKEVVGKGAFKTVYKAFDEVDGIEVAWGQVQIDEVLQSPGDLERLYSEVHLLKSLRHNNIVRFYNSWIDNKHKTVNMITELFTSGSLRQYRIKHKKIDMKVVKGWARQILTGLNYLHNHNPPIIHRDLKCDNIFINGHQGEVKIGDLGLATFLEQSNAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECKNSAQIYKKVSSGIMPAALSKIKDPEIKSFIDKCLVPASRRLSAKQLLMDSFLQVTNLAKNQSFPLSNIVIPNMVASENQCLLSEGGVSARNGATSMDLDDTPPVITVFDNSSNGASTFSCVEIRRLKGDYIFFLKGEENDESSVSLVLRIADQSGRARNIDFTFYLNSDTAVSVSNEMVEHLELADQNVKFIAELIDLLLINLIPTWKPCVVIDHLISPCGKGTRAKQPADSELAKYSESSEYTGQVMTEDIGPSNLPVLSIEKEDPYTVDLDDVLSHRNTDLGIATKTSESQMSYASAISDFESDKLSVVSFISAESGVSPLSLVRGSQSSFASEIAASPRSKLLDMGSNGMMSVSSSFDSDKLSIVSFISSESGVSPLSLVRGIQSSFASEIVASPRSKLLDMGSNGMMSVSSSFELDDDLKIELEKIEQKYQEAIKDLCKRRDEAIMETRRRMSEKMQL* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0680 701 Gene3D Phosphorylase Kinase; domain 1 20 115 - -
Lan12g0680 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Lan12g0680 701 MobiDBLite consensus disorder prediction 1 27 - -
Lan12g0680 701 Pfam Protein kinase domain 37 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0680 701 CDD STKc_WNK 32 291 - -
Lan12g0680 701 SMART serkin_6 34 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0680 701 Gene3D - 381 451 - -
Lan12g0680 701 Gene3D Transferase(Phosphotransferase) domain 1 117 297 - -
Lan12g0680 701 Coils Coil 659 679 - -
Lan12g0680 701 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK6-RELATED 4 698 - -
Lan12g0680 701 SUPERFAMILY Protein kinase-like (PK-like) 36 292 IPR011009 -
Lan12g0680 701 ProSiteProfiles Protein kinase domain profile. 34 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan12g0680 701 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 4 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0680 Lan-Chr12 13597975 13601631 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0680 134 458 MAP Kinase Kinase Kinase AT1G49160 68.000 1.71e-157 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lan12g0680 Pkinase 5.9e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0680 K08867 - gmx:121175054 775.778