Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0672 ATGGCGAAATCACCCGAAAACGAGCACCCACACAAATCTTTTGGTTGGGCTGCCACAGATACTTCTGGCATTCTTTCTCCCTTCCATTTCTCTAGAAGGGAAAATGGCCCTGATGACGTTGCTATTAAAATCCTTTTCTGTGGTGTTTGCCATTCGGATCTGCATACCGTCAAAAACGATTGGGGTTTCACTACTTACCCTGTTGTTCCTGGGCATGAAATTGTTGGTATTGTGACAAAAACTGGAGATAATGTGAAAAAATTCAAAGTGGGTGATAGAGTTGGAGTTGGCGTTATAGTGGAATCTTGTAAGGAATGTGAGTGTTGCCAACAGGATCTGGAGAGTTATTGTCCTAAACCTGTGTTTACCTATAACTCTCCTTATTATGATGGGACAAGAACCCATGGTGGCTATTCTGACTTTGTGGTTGTTCATCAGCATTATGTTCTTCAATTTCCTGAAAATTTGCCCCTTGATGCTGGTGCTCCATTACTGTGTGCTGGTATTACTGTGTATAGCCCAATGATTTATTATGGGATGACAGAGCCAGGTAAACACTTGGGTGTGGCAGGGCTTGGTGGATTGGGCCATGTTGCAATCAAATTTGGTAAAGCATTTGGTCTGAAAGTTACTGTTATCAGTAGCTCTCCAAACAAGGAATTTGAAGCCATTAACAAACTTGGGGCTGATTCTTTCCTTCTATCCACAGACCCTGCAAAATTCAAAGAAGCTATAGGGACCCTGGACTATATCATAGACACAATCTCTGCTGTTCATTCTCTGAATTCATTGCTTGCTCTACTGAAGCTGAATGGGAAGCTGGTCACTGTTGGGTTGCCTAGCAAGCCTCTCGAGCTGCCGGTCTTTCCGCTAGTTATGGGAAGAAAGCTTATAGGGGGGAGCAACTTTGGAGGGTTAAAGGAAACTCAGGAAATGCTTGATTTTTGTGGGAAGCACAACATAACTGCTGATATTGAGCTGATTAAAATAGACCAAATCAATACAGCCATGGAAAGGCTTGTCAAATCTGATGTCAAATATCGCTTTGTGATTGATGTGGGTAACTCCTTATCAACTTCATAG 1083 0.4247 MAKSPENEHPHKSFGWAATDTSGILSPFHFSRRENGPDDVAIKILFCGVCHSDLHTVKNDWGFTTYPVVPGHEIVGIVTKTGDNVKKFKVGDRVGVGVIVESCKECECCQQDLESYCPKPVFTYNSPYYDGTRTHGGYSDFVVVHQHYVLQFPENLPLDAGAPLLCAGITVYSPMIYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISSSPNKEFEAINKLGADSFLLSTDPAKFKEAIGTLDYIIDTISAVHSLNSLLALLKLNGKLVTVGLPSKPLELPVFPLVMGRKLIGGSNFGGLKETQEMLDFCGKHNITADIELIKIDQINTAMERLVKSDVKYRFVIDVGNSLSTS* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0672 360 Gene3D - 16 353 - -
Lan12g0672 360 Pfam Alcohol dehydrogenase GroES-like domain 37 151 IPR013154 -
Lan12g0672 360 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 11 358 - -
Lan12g0672 360 PANTHER ALDEHYDE REDUCTASE 11 358 - -
Lan12g0672 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Lan12g0672 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Lan12g0672 360 SUPERFAMILY GroES-like 20 185 IPR011032 -
Lan12g0672 360 CDD CAD1 14 352 - -
Lan12g0672 360 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Lan12g0672 360 Gene3D - 167 323 - -
Lan12g0672 360 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0672 Lan-Chr12 13527571 13531300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0672 11 357 Monolignol Biosynthesis Gene Families AT2G21890 70.690 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0672 K00083 - gmx:100819684 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0672 12 13527571 13531300 Lan1g1579 1 26725253 26734980 LSH