Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0665 ATGGGTCCGTTGACACTGTCAGTTACTGTTCAAGACTCTTCCATTTCATCACCAGACGCTTGTACTAAGAGGAAACAAAACTCACGTGTGAGGAATTCTTTTGCATCAGTTAGCATTCGAGATGAAAATCCCTTCGACTTCGTACGCACTTTATTTGAGGGTGTTATCGCAGGAGGTACAGCGGGAGTTGTTGTTGAAACAGCTTTATACCCAATCGACACCATAAAAACACGTCTGCAGGCTGCTCGTGGTGGAGAAAAACTAGTTTTTAAAGGCCTCTATTCTGGATTGGCAGGGAACCTTGCTGGTGTCTTACCGGCATCTGCTCTATTTGTTGGAGTTTATGAACCTATGAAGCAGAAATTGTTGAGGGTGTTTCCTGAAAATCTGAGTGCTTTTGCTCATTTGACTGCAGGTGCCCTAGGGGGTATTGCTGCTTCACTGATTCGTGTTCCAACAGAGGTTGTTAAGCAACGAATGCAAACTAGGCAGTTTACTTCAGCTTCTGGTGCTGTTCGCTATATTGCTTCTAAGGAGGGATTTAAAGGACTTTATGCGGGATATGGATCATTTTTACTGCGGGATTTGCCCTTTGATGCTATTCAATTTTGCCTCTATGAGCAGATTCGAATAGGTTATAAGCTTGCGGCACGGAGAGATCTGAACGATCCAGAAAATGCACTTATTGGTGCTTTTGCAGGTGCGCTAACTGGAGCTATAACTACCCCCCTTGATGTCATAAAGACAAGGTTAATGATTCAAGGATCTGGAAACCAATACAAGGGAATCGTAGATTGTGTTCAAACCATTATAAAGGAAGAGGGACCTAGTGCCCTTTTGAAGGGTGTTGGACCTAGAGTACTATGGATAGGTATAGGTGGTTCAATATTCTTTGGTGTCCTTGAGAGTTCAAAACGTTTTCTTTCTGAGAGGCGTCCTGCATTGACTCAGTCCTCAAAGTCAGACAAACATGAAGATTAA 981 0.4322 MGPLTLSVTVQDSSISSPDACTKRKQNSRVRNSFASVSIRDENPFDFVRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLVFKGLYSGLAGNLAGVLPASALFVGVYEPMKQKLLRVFPENLSAFAHLTAGALGGIAASLIRVPTEVVKQRMQTRQFTSASGAVRYIASKEGFKGLYAGYGSFLLRDLPFDAIQFCLYEQIRIGYKLAARRDLNDPENALIGAFAGALTGAITTPLDVIKTRLMIQGSGNQYKGIVDCVQTIIKEEGPSALLKGVGPRVLWIGIGGSIFFGVLESSKRFLSERRPALTQSSKSDKHED* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0665 326 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 6 318 - -
Lan12g0665 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 49 121 IPR018108 -
Lan12g0665 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 212 IPR018108 -
Lan12g0665 326 Pfam Mitochondrial carrier protein 225 310 IPR018108 -
Lan12g0665 326 Pfam Mitochondrial carrier protein 130 210 IPR018108 -
Lan12g0665 326 Pfam Mitochondrial carrier protein 51 123 IPR018108 -
Lan12g0665 326 PRINTS Mitochondrial carrier protein signature 54 67 IPR002067 GO:0055085
Lan12g0665 326 PRINTS Mitochondrial carrier protein signature 67 81 IPR002067 GO:0055085
Lan12g0665 326 PRINTS Mitochondrial carrier protein signature 185 203 IPR002067 GO:0055085
Lan12g0665 326 PRINTS Mitochondrial carrier protein signature 230 252 IPR002067 GO:0055085
Lan12g0665 326 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 6 318 - -
Lan12g0665 326 SUPERFAMILY Mitochondrial carrier 52 302 IPR023395 -
Lan12g0665 326 Gene3D Mitochondrial carrier domain 43 324 IPR023395 -
Lan12g0665 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 307 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0665 Lan-Chr12 13462066 13467426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0665 136 313 Chloroplast and Mitochondria Gene Families AT2G30160 30.435 3.69e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0665 K15111 - gmx:100811130 539.65