Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0635 ATGGCTTTGTCAGCAATTGAAAGCTTCAAAGTTGAGGATCATGTGGTGGTAGACACTGAGAAGAACAATATTCAAGAACATTCTGAAACTTCTAAATGGGTTCTCAGTGCTCCTGATCCTCCAACTTTGTGGTATCAAATTGTGGTTTCTGTGAGGAACAGCATTTCACACTATCAACAATGGTGCTCCTCTCTTAGAGGCCAACATAGAGCCAAAGTTGTGCTCTCATTCTTGACTGCTATTTTTCCTATACTTGATTGGGGTCACAATTATACTGTAACCAAATTCAGGAATGATTTACTTGCAGGCCTAACTATTGCTAGTCTCTGCATCCCTCAGAGCATTGGTTATGCTACTTTAGCAAAGCTTGATCCTGAATATGGTCTATATACAAGTGTGGTGCCACCTCTTATCTATGCTATAATGGGAACATCAAGAGAAATAGCAATTGGACCTGTGGCAGTGGTATCTCTTCTTTTGTCATCAATGATTCAGAAATTAATAGACCCTGTTGCTGATCCCGTTGGTTACAGAAAGCTTGTTTTTACTGCAACTCTCTTTGCTGGTATATTTCAAGCTGCTTTTGGACTCTTAAGGTTGGGATTCTTTGTGGATTTTCTGTCCCATGCTGCTATTGTTGGGTTCATGGCTGGAGCAGCTATAATAATTGGTCTTCAACAGCTCAAGGGACTGTTTGGGATCAATCATTTTACCAACAACACTGACATAATCTCTGTCATGAAATCTGTTTGGGAATCAGTTCATCATCCGTGGAACCCCCTAAATTTTGTCCTGGGATGTTCATTCTTCATTTTCATTCTACTTACAAGACTTCTGGGTAAAAGGAACAGAAAACTGTATTGGCTGCCAGCAATATCTCCTCTTATATCAGTGATACTAGCAACAGTTATTGTTTTTGTAACAAGAGCTGACAAAAGTGGAGTGAATATTGTCAAACATATAAAAGGAGGACTAAATCCAATTTCTATGAATGAGATTGAGTTTAATAGCCCCCATGTTGGAGCATTGGCCAAAATTGGACTAGTTGTTGCTATTGTTGCACTTACTGAATCAGTTTCTGTTGGTCGATCTTTTGCATCGATGAAAGGATATCACCTTGATGGAAACAAGGAAATGGTGTCATTAGGCTTCATGAACATCATAGGATCCTTCACTTCTTGCTATGTTGCAACTGGTTCATTCTCCCGCACAGTGGTTAATTTCACTGCTGGATGTGAAACATTAATGTCAAACATAGTGATGGCAGTTACAGTCATTATATCACTACTATGTCTCACAAAGTTATTGTATTTTACACCAACTGCAATTCTTGCTTCAATAATCCTTTCAGCTTTGCCAGGACTTATAGACATAAATGAAGGTTACAAAATATGGAAAACTGATAAGGTTGACTTCCTTGCTTGCATTGGAGCTTTCTTTGGAGTGATGTTTGTGTCAGTGGAAATTGGTCTGCTAGTGGCTGTGGCCATATCTTTTATGAAGATCATTTTTTTGTCTATTGGACCTGGCATAGAAACTTTGGGAAAACTTCCAGGCACAAATATGTTCTGTGATGTTCATCAATATCCTATGGCTATAAAGATTCCTGGGGTTGTAATAGTACGCATCAAGTCTTCAATGCTATGTTTTTCTAATGCCAATTCTATTACAGAAAGGGTCACTAAATGGATCACTGAGGAAGAAACAGAAGGGGACAAGGAAGATACAAGAAGCATAATTCAGCTTGTAATCATTGATGCCTCAAATTTGGTGAGCATTGACACTTCAGGAATTGCTTCTCTTGAGAAACTACATAAAAATTTGGTCTCAAGTGGAAAGCAGTTAGCCATTGCCAATCCAAGATGGAAAGTGATTTACAAGCTGAAGACAACCAACTTTGTAAAAAGAATTGGAGGAAGGGTCTTTTTAACTGTTGGAGAAGCTGTTGAATCCAAGCTAGATTGCTAA 1968 0.3867 MALSAIESFKVEDHVVVDTEKNNIQEHSETSKWVLSAPDPPTLWYQIVVSVRNSISHYQQWCSSLRGQHRAKVVLSFLTAIFPILDWGHNYTVTKFRNDLLAGLTIASLCIPQSIGYATLAKLDPEYGLYTSVVPPLIYAIMGTSREIAIGPVAVVSLLLSSMIQKLIDPVADPVGYRKLVFTATLFAGIFQAAFGLLRLGFFVDFLSHAAIVGFMAGAAIIIGLQQLKGLFGINHFTNNTDIISVMKSVWESVHHPWNPLNFVLGCSFFIFILLTRLLGKRNRKLYWLPAISPLISVILATVIVFVTRADKSGVNIVKHIKGGLNPISMNEIEFNSPHVGALAKIGLVVAIVALTESVSVGRSFASMKGYHLDGNKEMVSLGFMNIIGSFTSCYVATGSFSRTVVNFTAGCETLMSNIVMAVTVIISLLCLTKLLYFTPTAILASIILSALPGLIDINEGYKIWKTDKVDFLACIGAFFGVMFVSVEIGLLVAVAISFMKIIFLSIGPGIETLGKLPGTNMFCDVHQYPMAIKIPGVVIVRIKSSMLCFSNANSITERVTKWITEEETEGDKEDTRSIIQLVIIDASNLVSIDTSGIASLEKLHKNLVSSGKQLAIANPRWKVIYKLKTTNFVKRIGGRVFLTVGEAVESKLDC* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0635 655 CDD STAS_SulP_like_sulfate_transporter 529 643 - -
Lan12g0635 655 PANTHER LOW AFFINITY SULFATE TRANSPORTER 3-LIKE 21 652 - -
Lan12g0635 655 Gene3D STAS domain 509 653 IPR036513 -
Lan12g0635 655 ProSiteProfiles STAS domain profile. 548 652 IPR002645 -
Lan12g0635 655 TIGRFAM sulP: sulfate permease 83 641 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan12g0635 655 PANTHER SULFATE TRANSPORTER 21 652 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan12g0635 655 SUPERFAMILY SpoIIaa-like 533 650 IPR036513 -
Lan12g0635 655 Pfam STAS domain 529 648 IPR002645 -
Lan12g0635 655 Pfam Sulfate permease family 96 476 IPR011547 GO:0016021
Lan12g0635 655 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0635 Lan-Chr12 13213686 13219004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0635 25 651 Inorganic Solute Cotransporters AT5G10180 65.127 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0635 K17469 - gmx:100775538 1032.32