Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0629 ATGCCTCAGCAGAATGTGGTAATGTCTGATACAAAATCAGGAATCAACACGGCTGTTACGGTTGCGCAAAAGCCGCCGGCGGTGCCGAGAGGTTACATTCCCTATCCTTATCCAAGGAGTAGGAGGGTTTTGAAGAACCTTGAAATCAATGGAGAACAAAGAATTAATGCATGGGTTGATTCCATGAGAGCCTCTTCTCCAACTAATGCTAAATCCACTCCTTCTTTGGCTGAAGAACAATACAAATCTTGGATTCTTCACCATCCTTCAGCATTAGACATGTTTGAACAAATAGTGGATGCATCAAAAGGAAAGCAAATTGTTATGTTCCTAGATTATGATGGTACCTTGTCTCCTATAGTTGATGATCCTGACCGTGCCTTCATGTCTGATTCGATGAGACAAACAGTGAGGAAACTTGCAAGGAGTTTTCCTACTGCTATAGTTACTGGTAGATGCATAGACAAGGTATACAATTTTGTTCGGTTGGAAGAGTTATATTATGCTGGAAGCCATGGTATGGATATTAAAGGGCCATCAAAGAGCTTCAAAATCAACAAAGATAAAGAATCAGAGGAAGTTGTTTTTCAACCTGCTAGTGAATTTCTTCCCATGATAGATGAGGTATACCAACAATTGGTTGAGAAAAGTAAATCAACTCCTGGAGCCAGAGTTGAGAATAACAAATTTTGCATATCTGTTCATTTTCGTTGTGTTGATGAAAAGAAATGGGGTGAACTAGCACAGAAAGTGAGATCAGTGTTAAAGGAGTACCCAAAACTTCGTCTCACCCAAGGAAGAAAGGTATTGGAGATTCGTCCCACTATTAAATGGGACAAAGGGATGGCCCTGGAATTTTTGTTAGAGTCACTTGGATTGGCCAACTGTACCGATGTCTTTCCGATTTATATCGGTGATGATAAAACCGACGAAGACGCATTCAAGAAACTTAGAGACAGAGGACAAGGTCTTGGGATCCTGGTTTCAAAATTTCCAAAGGACACTAGTGCATCATACTCTTTACAAGAACCAAATGAGGTGATGGATTTCCTTCAACGTTTGGTGGAGTGGAAACAAGTGAGAGCACGTTCCCGGGTGTAA 1101 0.4096 MPQQNVVMSDTKSGINTAVTVAQKPPAVPRGYIPYPYPRSRRVLKNLEINGEQRINAWVDSMRASSPTNAKSTPSLAEEQYKSWILHHPSALDMFEQIVDASKGKQIVMFLDYDGTLSPIVDDPDRAFMSDSMRQTVRKLARSFPTAIVTGRCIDKVYNFVRLEELYYAGSHGMDIKGPSKSFKINKDKESEEVVFQPASEFLPMIDEVYQQLVEKSKSTPGARVENNKFCISVHFRCVDEKKWGELAQKVRSVLKEYPKLRLTQGRKVLEIRPTIKWDKGMALEFLLESLGLANCTDVFPIYIGDDKTDEDAFKKLRDRGQGLGILVSKFPKDTSASYSLQEPNEVMDFLQRLVEWKQVRARSRV* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0629 366 SUPERFAMILY HAD-like 108 357 IPR036412 -
Lan12g0629 366 Gene3D - 107 195 IPR023214 -
Lan12g0629 366 Gene3D - 211 365 IPR023214 -
Lan12g0629 366 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 364 - -
Lan12g0629 366 TIGRFAM T6PP: trehalose-phosphatase 105 355 IPR003337 GO:0003824|GO:0005992
Lan12g0629 366 CDD HAD_TPP 108 348 - -
Lan12g0629 366 Pfam Trehalose-phosphatase 110 344 IPR003337 GO:0003824|GO:0005992
Lan12g0629 366 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 109 320 IPR006379 -
Lan12g0629 366 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 364 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0629 Lan-Chr12 13140666 13143852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0629 103 354 Trehalose Biosynthesis Gene Families AT1G70290 25.556 2.01e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0629 K01087 - gmx:100794430 608.986